RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 GRK2P25098 689 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 SERPINB8P50452 374 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 STRA8Q7Z7C7 330 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 C10orf107Q8IVU9 208 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 CFAP61Q8NHU2 1237 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 KCNV2Q8TDN2 545 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 RILPQ96NA2 401 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 DMAP1Q9NPF5 467 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 COPG2Q9UBF2 871 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 TAGLN3Q9UI15 199 aa18.37■□□□□ 0.53
PDLIM7-207ENST00000486828 ARHGAP42A6NI28 874 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 ZNF623O75123 536 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 ENO1P06733 434 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 CCDC153Q494R4 210 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 CERCAMQ5T4B2 595 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 TMPRSS6Q8IU80 811 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 ARHGAP24Q8N264 748 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 ZSCAN18Q8TBC5 510 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 DQX1Q8TE96 717 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 RNF34Q969K3 372 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 PKMYT1Q99640 499 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 EBF4Q9BQW3 602 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 OSBPL2Q9H1P3 480 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 SORCS3Q9UPU3 1222 aa18.36■□□□□ 0.53
PDLIM7-207ENST00000486828 B2RBV5 119 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 B3GAT3O94766 335 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 RPLP2P05387 115 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 RAB27AP51159 221 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 ALDH18A1P54886 795 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 COG7P83436 770 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 ZNF33AQ06730 810 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 KHDC1Q4VXA5 237 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 BEND5Q7L4P6 421 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 CMC1Q7Z7K0 106 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 TSGA13Q96PP4 275 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 AGAP2Q99490 1192 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 TRIM62Q9BVG3 475 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 CFHR5Q9BXR6 569 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 IL22Q9GZX6 179 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 UPF3AQ9H1J1 476 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 TMLHEQ9NVH6 421 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 H0Y3Z8 333 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 AP3B1O00203 1094 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 ATP9BO43861 1147 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 PGK1P00558 417 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 POMCP01189 267 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 JCHAINP01591 159 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 IGLV3-25P01717 112 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 MPOP05164 745 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 CYBAP13498 195 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 CYP2C18P33260 490 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 BRCC3P46736 316 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 CPA2P48052 419 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 CDK7P50613 346 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 TUBB3Q13509 450 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 PRPSAP1Q14558 356 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 PAN2Q504Q3 1202 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 FSTL4Q6MZW2 842 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 CD300LGQ6UXG3 332 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 PPP4R1Q8TF05 950 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 MFSD3Q96ES6 412 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 CELF6Q96J87 481 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 MYCBPQ99417 103 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 FAM96AQ9H5X1 160 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 DSEQ9UL01 958 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 PADI3Q9ULW8 664 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 SOX13Q9UN79 622 aa18.35■□□□□ 0.53
PDLIM7-207ENST00000486828 SPECC1L-ADORA2AF8WAN1 911 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 M0QZQ0 153 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 PSMD3O43242 534 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 MGEA5O60502 916 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 MAGEC1O60732 1142 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 RALBP11234 206 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 CPA3P15088 417 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 CD52P31358 61 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 PGM1P36871 562 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 RAP1GDS1P52306 607 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 CSE1LP55060 971 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 CDH17Q12864 832 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 EIF4EBP2Q13542 120 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 KPNB1Q14974 876 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 HSP90AA5PQ58FG0 334 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 NAPEPLDQ6IQ20 393 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 KCNMB4Q86W47 210 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 KLHDC8BQ8IXV7 354 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 SORT1Q99523 831 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 APOL2Q9BQE5 337 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 ARHGEF38Q9NXL2 777 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 NEU3Q9UQ49 428 aa18.34■□□□□ 0.53
PDLIM7-207ENST00000486828 TIMM44O43615 452 aa18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 CACNG3O60359 315 aa18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 DNAJB2P25686 324 aa18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 HARS2P49590 506 aaKnown RBP18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 ABCE1P61221 599 aaKnown RBP18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 MPP3Q13368 585 aa18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 RCN2Q14257 317 aa18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 OR6Y1Q8NGX8 325 aa18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 AZIN2Q96A70 460 aa18.33■□□□□ 0.53
PDLIM7-207ENST00000486828 ATXN7L3BQ96GX2 97 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms