RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ATP9BO43861 1147 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 DFNA5O60443 496 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 CLDN11O75508 207 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 CAPNS1P04632 268 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 GGCXP38435 758 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 GRK6P43250 576 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 ZNF177Q13360 481 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-214ENST00000486311 DRAP1Q14919 205 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-214ENST00000486311 LRSAM1Q6UWE0 723 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 CCNI2Q6ZMN8 369 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-214ENST00000486311 OR52K2Q8NGK3 314 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 OR14C36Q8NHC7 312 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 SKA1Q96BD8 255 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 PIGVQ9NUD9 493 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 ARHGEF38Q9NXL2 777 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.06■■□□□ 1.28
SREBF1-214ENST00000486311 SLC25A13Q9UJS0 675 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 TBC1D30Q9Y2I9 924 aa23.06■■□□□ 1.28
SREBF1-214ENST00000486311 DMXL2Q8TDJ6 3036 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 WNT1P04628 370 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 ATXN1LP0C7T5 689 aaKnown RBP23.05■■□□□ 1.28
SREBF1-214ENST00000486311 CYP11B1P15538 503 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 DRD3P35462 400 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 SCNN1AP37088 669 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 GABRB2P47870 512 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 CXCR3P49682 368 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 CDH4P55283 916 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 KCNMA1Q12791 1236 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 RAPGEF1Q13905 1077 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 BRMS1LQ5PSV4 323 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 KLHDC7AQ5VTJ3 777 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 DSG4Q86SJ6 1040 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 NT5C3BQ969T7 300 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 PGAP3Q96FM1 320 aaPredicted RBP23.05■■□□□ 1.28
SREBF1-214ENST00000486311 PDCL3Q9H2J4 239 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 STAP1Q9ULZ2 295 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 FHOD1Q9Y613 1164 aa23.05■■□□□ 1.28
SREBF1-214ENST00000486311 PKD1L2Q7Z442 2459 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 A0A1B0GTQ1 180 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 A0A1W2PR77 199 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 ADCY5O95622 1261 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 HSP90AA4PQ58FG1 418 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 OR8D1Q8WZ84 308 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 NAA15Q9BXJ9 866 aaKnown RBP23.04■■□□□ 1.28
SREBF1-214ENST00000486311 TKTL2Q9H0I9 626 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 SIK2Q9H0K1 926 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 WDCPQ9H6R7 721 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 ANLNQ9NQW6 1124 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 AASDHPPTQ9NRN7 309 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 TMEM51Q9NW97 253 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 VPS28Q9UK41 221 aa23.04■■□□□ 1.28
SREBF1-214ENST00000486311 WNT9AO14904 365 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 ALOX15BO15296 676 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 SLC7A4O43246 635 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 TNFSF14O43557 240 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 LATO43561 262 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 TFE3P19532 575 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-214ENST00000486311 CD38P28907 300 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 SULT1E1P49888 294 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 METAP1P53582 386 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 RNASE9P60153 205 aaKnown RBP23.03■■□□□ 1.28
SREBF1-214ENST00000486311 SCAPQ12770 1279 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 DLG2Q15700 870 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 INAVAQ3KP66 663 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 ACCSLQ4AC99 568 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 FAM46CQ5VWP2 391 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-214ENST00000486311 C18orf8Q96DM3 657 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 ELF4Q99607 663 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-214ENST00000486311 NUP62CLQ9H1M0 184 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 KDM4CQ9H3R0 1056 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 SARDHQ9UL12 918 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 PPM1HQ9ULR3 514 aa23.03■■□□□ 1.28
SREBF1-214ENST00000486311 CABIN1Q9Y6J0 2220 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 FAM208BQ5VWN6 2430 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 I6L893 689 aaPredicted RBP23.02■■□□□ 1.28
SREBF1-214ENST00000486311 MCF2LO15068 1137 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 CNTN5O94779 1100 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 F9P00740 461 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 PPP2CBP62714 309 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 PPP2CAP67775 309 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 IL9RQ01113 521 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 CT47A1Q5JQC4 288 aaPredicted RBP23.02■■□□□ 1.28
SREBF1-214ENST00000486311 TMPRSS7Q7RTY8 843 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 XYLT1Q86Y38 959 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 ZNF683Q8IZ20 524 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 SH2D3CQ8N5H7 860 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 SERAC1Q96JX3 654 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 SAMSN1Q9NSI8 373 aaKnown RBP23.02■■□□□ 1.28
SREBF1-214ENST00000486311 PAXBP1Q9Y5B6 917 aa23.02■■□□□ 1.28
SREBF1-214ENST00000486311 TBC1D3DA0A087WVF3 549 aa23.01■■□□□ 1.27
SREBF1-214ENST00000486311 TBC1D3IA0A087WXS9 549 aa23.01■■□□□ 1.27
SREBF1-214ENST00000486311 TBC1D3EA0A087X179 549 aa23.01■■□□□ 1.27
SREBF1-214ENST00000486311 TBC1D3KA0A087X1G2 549 aa23.01■■□□□ 1.27
SREBF1-214ENST00000486311 TBC1D3FA6NER0 549 aaPredicted RBP23.01■■□□□ 1.27
SREBF1-214ENST00000486311 DRGXA6NNA5 263 aa23.01■■□□□ 1.27
SREBF1-214ENST00000486311 TBC1D3LB9A6J9 549 aa23.01■■□□□ 1.27
SREBF1-214ENST00000486311 TAF4O00268 1085 aa23.01■■□□□ 1.27
SREBF1-214ENST00000486311 PLRG1O43660 514 aaKnown RBP23.01■■□□□ 1.27
SREBF1-214ENST00000486311 RTN2O75298 545 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms