RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 SCML1Q9UN30 329 aa21.49■■□□□ 1.03
LMBR1-217ENST00000485985 RAXQ9Y2V3 346 aa21.49■■□□□ 1.03
LMBR1-217ENST00000485985 GOLGA4Q13439 2230 aaKnown RBP21.48■■□□□ 1.03
LMBR1-217ENST00000485985 TARSL2A2RTX5 802 aaKnown RBP21.48■■□□□ 1.03
LMBR1-217ENST00000485985 GOLGA8CPA6NN73 597 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 F8VZ95 297 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 KCNK3O14649 394 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 EEF1GP26641 437 aaKnown RBP21.48■■□□□ 1.03
LMBR1-217ENST00000485985 PSMD8P48556 350 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 PLK1P53350 603 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 BPIFB4P59827 614 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 SLC12A1Q13621 1099 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 C2CD6Q53TS8 623 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 RNF219Q5W0B1 726 aaPredicted RBP21.48■■□□□ 1.03
LMBR1-217ENST00000485985 C14orf80Q86SX3 495 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 ZDHHC17Q8IUH5 632 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 STK40Q8N2I9 435 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 AADATQ8N5Z0 425 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 TMEM35BQ8NCS4 154 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 EPS8L1Q8TE68 723 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 GANQ9H2C0 597 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 DKK4Q9UBT3 224 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 CHD5Q8TDI0 1954 aa21.48■■□□□ 1.03
LMBR1-217ENST00000485985 RNASEH1O60930 286 aaKnown RBP21.47■■□□□ 1.03
LMBR1-217ENST00000485985 ADCY5O95622 1261 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 CD27P26842 260 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 GABRB2P47870 512 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 KLK7P49862 253 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 METAP1P53582 386 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 SNX16P57768 344 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 RNASE9P60153 205 aaKnown RBP21.47■■□□□ 1.03
LMBR1-217ENST00000485985 SOWAHCQ53LP3 525 aaPredicted RBP21.47■■□□□ 1.03
LMBR1-217ENST00000485985 CDKAL1Q5VV42 579 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 KIAA0895LQ68EN5 471 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 TRNP1Q6NT89 227 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 XYLT1Q86Y38 959 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 MARCH9Q86YJ5 346 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 GALNT15Q8N3T1 639 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 GPT2Q8TD30 523 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 GANCQ8TET4 914 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 FRS2Q8WU20 508 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 HNRNPLLQ8WVV9 542 aaKnown RBP21.47■■□□□ 1.03
LMBR1-217ENST00000485985 NT5C3BQ969T7 300 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 NEUROG2Q9H2A3 272 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.47■■□□□ 1.03
LMBR1-217ENST00000485985 NCKAP1Q9Y2A7 1128 aa21.47■■□□□ 1.03
LMBR1-217ENST00000485985 URB1O60287 2271 aaKnown RBP21.46■■□□□ 1.03
LMBR1-217ENST00000485985 FAM47DPA6NHR8 397 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 C10orf142B7Z368 130 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 TNFSF14O43557 240 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 PCDHGA12O60330 932 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 RNASEH2AO75792 299 aaKnown RBP21.46■■□□□ 1.03
LMBR1-217ENST00000485985 SLC8A1P32418 973 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 GRK6P43250 576 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 CXCR3P49682 368 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 SULT1E1P49888 294 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 GALCP54803 685 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 C5orf22Q49AR2 442 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 CT47A1Q5JQC4 288 aaPredicted RBP21.46■■□□□ 1.03
LMBR1-217ENST00000485985 KCNT1Q5JUK3 1230 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 FAM102AQ5T9C2 384 aaPredicted RBP21.46■■□□□ 1.03
LMBR1-217ENST00000485985 NCEH1Q6PIU2 408 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 ZNF683Q8IZ20 524 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 TBCBQ99426 244 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 FEM1AQ9BSK4 669 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 TKTL2Q9H0I9 626 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 PDCL3Q9H2J4 239 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 TMPRSS4Q9NRS4 437 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 ARHGEF38Q9NXL2 777 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 ADAMTS1Q9UHI8 967 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 FZD4Q9ULV1 537 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 OR51B4Q9Y5P0 310 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 SNX10Q9Y5X0 201 aa21.46■■□□□ 1.03
LMBR1-217ENST00000485985 TRABD2BA6NFA1 517 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 H0Y8X5 98 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 CNTN5O94779 1100 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 MMEP08473 750 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 FLT3P36888 993 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 SCNN1AP37088 669 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 ANP32AP39687 249 aaKnown RBP21.45■■□□□ 1.02
LMBR1-217ENST00000485985 CTSKP43235 329 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 CCT8P50990 548 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 SULT2A1Q06520 285 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 ELAVL3Q14576 367 aaKnown RBP21.45■■□□□ 1.02
LMBR1-217ENST00000485985 ALFQ53S48 1182 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 ARTNQ5T4W7 220 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 RBM43Q6ZSC3 357 aaKnown RBP21.45■■□□□ 1.02
LMBR1-217ENST00000485985 ENOX1Q8TC92 643 aaKnown RBP21.45■■□□□ 1.02
LMBR1-217ENST00000485985 C18orf8Q96DM3 657 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 PGAP3Q96FM1 320 aaPredicted RBP21.45■■□□□ 1.02
LMBR1-217ENST00000485985 OMDQ99983 421 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 STK33Q9BYT3 514 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 SIK2Q9H0K1 926 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 EBF2Q9HAK2 575 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 SCUBE2Q9NQ36 999 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 RRN3Q9NYV6 651 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 STAP1Q9ULZ2 295 aa21.45■■□□□ 1.02
LMBR1-217ENST00000485985 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.44■■□□□ 1.02
LMBR1-217ENST00000485985 EPHB6O15197 1021 aa21.44■■□□□ 1.02
LMBR1-217ENST00000485985 LSM8O95777 96 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms