RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 BHLHA9Q7RTU4 235 aa5.39□□□□□ -1.55
CCDC66-219ENST00000484441 SLC25A41Q8N5S1 370 aa5.39□□□□□ -1.55
CCDC66-219ENST00000484441 WDR26Q9H7D7 661 aa5.39□□□□□ -1.55
CCDC66-219ENST00000484441 MRPL44Q9H9J2 332 aaKnown RBP5.39□□□□□ -1.55
CCDC66-219ENST00000484441 Q9N2J8 555 aa5.39□□□□□ -1.55
CCDC66-219ENST00000484441 SIRT3Q9NTG7 399 aaPredicted RBP5.39□□□□□ -1.55
CCDC66-219ENST00000484441 TMEM248Q9NWD8 314 aa5.39□□□□□ -1.55
CCDC66-219ENST00000484441 ARL15Q9NXU5 204 aa5.39□□□□□ -1.55
CCDC66-219ENST00000484441 CKAP5Q14008 2032 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 H0Y3Z8 333 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 H0YGN5 161 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 IKBKBO14920 756 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 PKMP14618 531 aaKnown RBP5.38□□□□□ -1.55
CCDC66-219ENST00000484441 CST5P28325 142 aaPredicted RBP5.38□□□□□ -1.55
CCDC66-219ENST00000484441 SLC16A2P36021 539 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 RFX2P48378 723 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 OAZ1P54368 228 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 PKP1Q13835 747 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 ERV3-1Q14264 604 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 RPS6KA2Q15349 733 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 SMAD1Q15797 465 aaKnown RBP5.38□□□□□ -1.55
CCDC66-219ENST00000484441 CCDC38Q502W7 563 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 HMBOX1Q6NT76 420 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 MTFR2Q6P444 385 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 AAGABQ6PD74 315 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 MEPCEQ7L2J0 689 aaKnown RBP5.38□□□□□ -1.55
CCDC66-219ENST00000484441 CCDC117Q8IWD4 279 aaPredicted RBP5.38□□□□□ -1.55
CCDC66-219ENST00000484441 TMEM217Q8N7C4 229 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 ASB5Q8WWX0 329 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 ARRDC3Q96B67 414 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 MPHOSPH6Q99547 160 aaKnown RBP5.38□□□□□ -1.55
CCDC66-219ENST00000484441 BRD8Q9H0E9 1235 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 G6PC2Q9NQR9 355 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 GRHPRQ9UBQ7 328 aa5.38□□□□□ -1.55
CCDC66-219ENST00000484441 SRP68Q9UHB9 627 aaKnown RBP5.38□□□□□ -1.55
CCDC66-219ENST00000484441 IGKV2D-30A0A075B6S6 120 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 TNFRSF13BO14836 293 aaPredicted RBP5.37□□□□□ -1.55
CCDC66-219ENST00000484441 CHN1P15882 459 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 HOXB6P17509 224 aaKnown RBP5.37□□□□□ -1.55
CCDC66-219ENST00000484441 TYK2P29597 1187 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 CCKBRP32239 447 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 MCM2P49736 904 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 CHAF1AQ13111 956 aaPredicted RBP5.37□□□□□ -1.55
CCDC66-219ENST00000484441 SCN4BQ8IWT1 228 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 FAM185AQ8N0U4 392 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 C3orf49Q96BT1 292 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 URB1-AS1Q96HZ7 61 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 TRAPPC9Q96Q05 1148 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 FRG2BQ96QU4 278 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 RBM38Q9H0Z9 239 aaKnown RBP5.37□□□□□ -1.55
CCDC66-219ENST00000484441 TBC1D14Q9P2M4 693 aa5.37□□□□□ -1.55
CCDC66-219ENST00000484441 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 IPO5O00410 1097 aaKnown RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 FAM155BO75949 473 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 HLA-DQA2P01906 255 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 TFRCP02786 760 aaKnown RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 TKTP29401 623 aaKnown RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 RHBDL3P58872 404 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 GXYLT1Q4G148 440 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 FAM171A1Q5VUB5 890 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 JMJD6Q6NYC1 403 aaPredicted RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 RASGRP2Q7LDG7 609 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 IGFN1Q86VF2 1251 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 VPS37AQ8NEZ2 397 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 OR6Y1Q8NGX8 325 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 BICD2Q8TD16 824 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 ZNF419Q96HQ0 510 aaPredicted RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 WDR77Q9BQA1 342 aaPredicted RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 TWSG1Q9GZX9 223 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 ACTR5Q9H9F9 607 aaPredicted RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 SEPSECSQ9HD40 501 aaKnown RBP5.36□□□□□ -1.55
CCDC66-219ENST00000484441 ZDHHC7Q9NXF8 308 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 KCND3Q9UK17 655 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 ZNF580Q9UK33 172 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 BAG5Q9UL15 447 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 PCDHA7Q9UN72 937 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 SLC4A4Q9Y6R1 1079 aa5.36□□□□□ -1.55
CCDC66-219ENST00000484441 TCRBV7S3A2A0A539 114 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 ACP5P13686 325 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 ALKBH1Q13686 389 aaKnown RBP5.35□□□□□ -1.55
CCDC66-219ENST00000484441 DUSP6Q16828 381 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 C5orf22Q49AR2 442 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 RRAGAQ7L523 313 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 GALNT7Q86SF2 657 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 CCDC25Q86WR0 208 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 C7orf57Q8NEG2 295 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 ENGASEQ8NFI3 743 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 GABPB2Q8TAK5 448 aaPredicted RBP5.35□□□□□ -1.55
CCDC66-219ENST00000484441 C2CD4CQ8TF44 421 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 HDAC7Q8WUI4 952 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 B3GNT4Q9C0J1 378 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 ISCUQ9H1K1 167 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 HIPK3Q9H422 1215 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 PLAC1Q9HBJ0 212 aa5.35□□□□□ -1.55
CCDC66-219ENST00000484441 RPS10-NUDT3A0A1W2PQS6 291 aa5.34□□□□□ -1.55
CCDC66-219ENST00000484441 LYL1P12980 280 aa5.34□□□□□ -1.55
CCDC66-219ENST00000484441 TNFSF8P32971 234 aa5.34□□□□□ -1.55
CCDC66-219ENST00000484441 PRKAA2P54646 552 aa5.34□□□□□ -1.55
CCDC66-219ENST00000484441 SELENOVP59797 346 aa5.34□□□□□ -1.55
CCDC66-219ENST00000484441 WASHC2DQ5SRD0 308 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms