RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 KNL1Q8NG31 2342 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 A0A0D9SEW6 157 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 TCRBV5S1A1TA0A578 114 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 MED19A0JLT2 244 aaPredicted RBP12.61□□□□□ -0.39
MSH5-216ENST00000484309 SIGLEC16A6NMB1 481 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 DRGXA6NNA5 263 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 C4orf47A7E2U8 309 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 FAM72CH0Y354 149 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 MID1O15344 667 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 BNIP3LO60238 219 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 IGLV3-19P01714 112 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 GLDCP23378 1020 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 OXTRP30559 389 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 ADRA1BP35368 520 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 NNMTP40261 264 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 OXCT1P55809 520 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 SULT2A1Q06520 285 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 KLHL30Q0D2K2 578 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 CST6Q15828 149 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 SKOR2Q2VWA4 1001 aaPredicted RBP12.61□□□□□ -0.39
MSH5-216ENST00000484309 UAP1L1Q3KQV9 507 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 ARL13BQ3SXY8 428 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 TTC31Q49AM3 519 aaPredicted RBP12.61□□□□□ -0.39
MSH5-216ENST00000484309 FAM72AQ5TYM5 149 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 PEAR1Q5VY43 1037 aaPredicted RBP12.61□□□□□ -0.39
MSH5-216ENST00000484309 FAM72DQ6L9T8 149 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 SCYL2Q6P3W7 929 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 STRADAQ7RTN6 431 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 FAM72BQ86X60 149 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 ZCCHC9Q8N567 271 aaKnown RBP12.61□□□□□ -0.39
MSH5-216ENST00000484309 OR7D4Q8NG98 312 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 CPLX3Q8WVH0 158 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 PTPRN2Q92932 1015 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 C1orf74Q96LT6 269 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 HAPLN3Q96S86 360 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 PSMB7Q99436 277 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 NUP58Q9BVL2 599 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 NUSAP1Q9BXS6 441 aaKnown RBP12.61□□□□□ -0.39
MSH5-216ENST00000484309 PABPC3Q9H361 631 aaKnown RBP12.61□□□□□ -0.39
MSH5-216ENST00000484309 C6orf106Q9H6K1 298 aaPredicted RBP12.61□□□□□ -0.39
MSH5-216ENST00000484309 FBRSQ9HAH7 460 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 SERGEFQ9UGK8 458 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 TBC1D30Q9Y2I9 924 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 LAMA1P25391 3075 aa12.61□□□□□ -0.39
MSH5-216ENST00000484309 NCOR2Q9Y618 2525 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 IGLV3-10A0A075B6K4 115 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 A0A1W2PP55 124 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 TARSL2A2RTX5 802 aaKnown RBP12.6□□□□□ -0.39
MSH5-216ENST00000484309 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 FAM47DPA6NHR8 397 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 PLK4O00444 970 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 DDX3XO00571 662 aaKnown RBP eCLIP12.6□□□□□ -0.39
MSH5-216ENST00000484309 RNASEH1O60930 286 aaKnown RBP12.6□□□□□ -0.39
MSH5-216ENST00000484309 MT-CO1P00395 513 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 ENGP17813 658 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 OR1E1P30953 314 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 PBX1P40424 430 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 METAP1P53582 386 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 LIMK1P53667 647 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 OGDHQ02218 1023 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 DUOXA1Q1HG43 343 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 TDRD12Q587J7 1177 aaKnown RBP12.6□□□□□ -0.39
MSH5-216ENST00000484309 WDR45BQ5MNZ6 344 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 PPP1R15BQ5SWA1 713 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 RWDD4Q6NW29 188 aaKnown RBP12.6□□□□□ -0.39
MSH5-216ENST00000484309 DCUN1D2Q6PH85 259 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 SLC23A3Q6PIS1 610 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 LINGO4Q6UY18 593 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 Q6ZVU0 165 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 PYROXD2Q8N2H3 581 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 KDM1BQ8NB78 822 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 OR2I1PQ8NGU4 316 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 FRS2Q8WU20 508 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 CENPIQ92674 756 aaPredicted RBP12.6□□□□□ -0.39
MSH5-216ENST00000484309 FOXJ1Q92949 421 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 FAM129BQ96TA1 746 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 SPON2Q9BUD6 331 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 GTPBP2Q9BX10 602 aaKnown RBP12.6□□□□□ -0.39
MSH5-216ENST00000484309 ZYG11BQ9C0D3 744 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 TMEM9BQ9NQ34 198 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 FBXL12Q9NXK8 326 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 AIPL1Q9NZN9 384 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 ZNF212Q9UDV6 495 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 OR12D3Q9UGF7 316 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 EVLQ9UI08 416 aaPredicted RBP12.6□□□□□ -0.39
MSH5-216ENST00000484309 EIF2B4Q9UI10 523 aaKnown RBP12.6□□□□□ -0.39
MSH5-216ENST00000484309 VPS51Q9UID3 782 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 SLCO1B1Q9Y6L6 691 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
MSH5-216ENST00000484309 METTL12A8MUP2 240 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 K7ERQ8 282 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 CDX4O14627 284 aaPredicted RBP12.59□□□□□ -0.39
MSH5-216ENST00000484309 RNASEH2AO75792 299 aaKnown RBP12.59□□□□□ -0.39
MSH5-216ENST00000484309 FSBPO95073 299 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 SEMA4FO95754 770 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 IL1BP01584 269 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 SERPINF2P08697 491 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms