RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 GRK6P43250 576 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 SLC25A52Q3SY17 297 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 BRMS1LQ5PSV4 323 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 FAM102AQ5T9C2 384 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-213ENST00000484112 TTC39BQ5VTQ0 682 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-213ENST00000484112 SPECC1LQ69YQ0 1117 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 SARM1Q6SZW1 724 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 SND1Q7KZF4 910 aaKnown RBP eCLIP10.32□□□□□ -0.76
CPSF4-213ENST00000484112 TAC4Q86UU9 113 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 VPS36Q86VN1 386 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
CPSF4-213ENST00000484112 ATP6V0D2Q8N8Y2 350 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 C3orf20Q8ND61 904 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 PIP4K2CQ8TBX8 421 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 CPA5Q8WXQ8 436 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 BIRC7Q96CA5 298 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 NPY6RQ99463 290 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 SYT11Q9BT88 431 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 XPO4Q9C0E2 1151 aaKnown RBP10.32□□□□□ -0.76
CPSF4-213ENST00000484112 BTBD1Q9H0C5 482 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 FAM204AQ9H8W3 233 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 ADAM22Q9P0K1 906 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 DKK4Q9UBT3 224 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 TJP2Q9UDY2 1190 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 TMEM59LQ9UK28 342 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 PLA2G4CQ9UP65 541 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-213ENST00000484112 LUC7L2Q9Y383 392 aaKnown RBP10.32□□□□□ -0.76
CPSF4-213ENST00000484112 WDFY3Q8IZQ1 3526 aa10.32□□□□□ -0.76
CPSF4-213ENST00000484112 FAM47DPA6NHR8 397 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 KCNU1A8MYU2 1149 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 PLK4O00444 970 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 MSI1O43347 362 aaKnown RBP10.31□□□□□ -0.76
CPSF4-213ENST00000484112 DKK1O94907 266 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 SEMA4FO95754 770 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 DNTTP04053 509 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 PRB1P04280 392 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 TPM1P09493 284 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 DESP17661 470 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 TNFAIP3P21580 790 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 HNRNPH3P31942 346 aaKnown RBP10.31□□□□□ -0.76
CPSF4-213ENST00000484112 ABCG1P45844 678 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 CCT8P50990 548 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 C21orf59P57076 290 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 KLHL30Q0D2K2 578 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 TAF5Q15542 800 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 KCNT1Q5JUK3 1230 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 PRAMEF14Q5SWL7 426 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 PIK3R6Q5UE93 754 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 ACAD10Q6JQN1 1059 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 MMS22LQ6ZRQ5 1243 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 CHST9Q7L1S5 443 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 HJURPQ8NCD3 748 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-213ENST00000484112 GANCQ8TET4 914 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 TMA16Q96EY4 203 aaKnown RBP10.31□□□□□ -0.76
CPSF4-213ENST00000484112 TRIM11Q96F44 468 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 PCDHB18PQ96TA0 734 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 PCED1AQ9H1Q7 454 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 HAUS4Q9H6D7 363 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 DDIT4Q9NX09 232 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 FTSJ1Q9UET6 329 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 PTPRBP23467 1997 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 ZZEF1O43149 2961 aa10.31□□□□□ -0.76
CPSF4-213ENST00000484112 A0A087WV48 116 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 ANKRD62A6NC57 917 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 SIGLEC16A6NMB1 481 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 M0QYT0 321 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 ENDOD1O94919 500 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 SERPING1P05155 500 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 MYBL1P10243 752 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 KRT3P12035 628 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 JUPP14923 745 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 CD27P26842 260 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 HLA-FP30511 346 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 SDC4P31431 198 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 PTPN9P43378 593 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 GRIA4P48058 902 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 CXCR3P49682 368 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 OXCT1P55809 520 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 CLDN6P56747 220 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 RPS14P62263 151 aaKnown RBP10.3□□□□□ -0.76
CPSF4-213ENST00000484112 PTP4A2Q12974 167 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 CAMK2GQ13555 558 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-213ENST00000484112 ARID5BQ14865 1188 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 SMAD1Q15797 465 aaKnown RBP10.3□□□□□ -0.76
CPSF4-213ENST00000484112 PTPRNQ16849 979 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 FAM133BQ5BKY9 247 aaKnown RBP10.3□□□□□ -0.76
CPSF4-213ENST00000484112 MS4A13Q5J8X5 152 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 MON1BQ7L1V2 547 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 STRADAQ7RTN6 431 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 BNIPLQ7Z465 357 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 GATAD2AQ86YP4 633 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 CCDC117Q8IWD4 279 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-213ENST00000484112 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.3□□□□□ -0.76
CPSF4-213ENST00000484112 WFIKKN2Q8TEU8 576 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 IGSF8Q969P0 613 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 C1orf74Q96LT6 269 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 PPP1R9BQ96SB3 815 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 TMEM245Q9H330 911 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms