RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 MPP6Q9NZW5 540 aa11.53□□□□□ -0.56
SORT1-204ENST00000482236 SLCO3A1Q9UIG8 710 aa11.53□□□□□ -0.56
SORT1-204ENST00000482236 INTS6Q9UL03 887 aaKnown RBP11.53□□□□□ -0.56
SORT1-204ENST00000482236 HPCAL4Q9UM19 191 aa11.53□□□□□ -0.56
SORT1-204ENST00000482236 SIK3Q9Y2K2 1263 aa11.53□□□□□ -0.56
SORT1-204ENST00000482236 ABCA7Q8IZY2 2146 aa11.53□□□□□ -0.56
SORT1-204ENST00000482236 MYO18AQ92614 2054 aaKnown RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3DA0A087WVF3 549 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3IA0A087WXS9 549 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3EA0A087X179 549 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3KA0A087X1G2 549 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 A0A1B0GVT2 93 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 SYCE3A1L190 88 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3FA6NER0 549 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3LB9A6J9 549 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 KPNA3O00505 521 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3HP0C7X1 549 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 C5AR1P21730 350 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 MMP8P22894 467 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 ETFBP38117 255 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 IRAK1P51617 712 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 JAM2P57087 298 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 SIM1P81133 766 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 DLG2Q15700 870 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 C15orf59Q2T9L4 293 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 INAVAQ3KP66 663 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 TDRD12Q587J7 1177 aaKnown RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 EFHC2Q5JST6 749 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 N4BP2L1Q5TBK1 243 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 KIAA0895LQ68EN5 471 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3GQ6DHY5 549 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3CQ6IPX1 549 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 CXorf57Q6NSI4 855 aaKnown RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 NCEH1Q6PIU2 408 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 C14orf80Q86SX3 495 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 SETD3Q86TU7 594 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D3Q8IZP1 549 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 PPP1R16AQ96I34 528 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 MRGPRX3Q96LB0 322 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 ERGIC2Q96RQ1 377 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 FEM1AQ9BSK4 669 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 ACE2Q9BYF1 805 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 GAREM1Q9H706 876 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 CAPN10Q9HC96 672 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 FZD4Q9ULV1 537 aa11.52□□□□□ -0.57
SORT1-204ENST00000482236 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.52□□□□□ -0.57
SORT1-204ENST00000482236 CDX4O14627 284 aaPredicted RBP11.51□□□□□ -0.57
SORT1-204ENST00000482236 GIPC1O14908 333 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 CNTN5O94779 1100 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 ENDOD1O94919 500 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 GJB6O95452 261 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 IGLV3-19P01714 112 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 CYP1A1P04798 512 aaPredicted RBP11.51□□□□□ -0.57
SORT1-204ENST00000482236 TPM3P06753 285 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 CEACAM1P13688 526 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 VAV1P15498 845 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 GOT1P17174 413 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 CSRP1P21291 193 aaKnown RBP11.51□□□□□ -0.57
SORT1-204ENST00000482236 CD27P26842 260 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 CSNK1EP49674 416 aaKnown RBP11.51□□□□□ -0.57
SORT1-204ENST00000482236 SUZ12Q15022 739 aaKnown RBP11.51□□□□□ -0.57
SORT1-204ENST00000482236 ALFQ53S48 1182 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 CCDC157Q569K6 752 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 C9orf64Q5T6V5 341 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 SFMBT2Q5VUG0 894 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 PEAR1Q5VY43 1037 aaPredicted RBP11.51□□□□□ -0.57
SORT1-204ENST00000482236 LINGO4Q6UY18 593 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 VPS36Q86VN1 386 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 DCAF4L2Q8NA75 395 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 OR2T34Q8NGX1 318 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 GRIN3AQ8TCU5 1115 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 BIRC7Q96CA5 298 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 TBC1D31Q96DN5 1066 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 PGAP3Q96FM1 320 aaPredicted RBP11.51□□□□□ -0.57
SORT1-204ENST00000482236 HAPLN3Q96S86 360 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 BPIFA3Q9BQP9 254 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 NEUROG2Q9H2A3 272 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 TMPRSS4Q9NRS4 437 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 VPS51Q9UID3 782 aa11.51□□□□□ -0.57
SORT1-204ENST00000482236 SPAARA0A1B0GVQ0 90 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 LRRC53A6NM62 1247 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 DAPK3O43293 454 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 CREB3O43889 395 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 SNAP91O60641 907 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 CHRNB2P17787 502 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 RRM1P23921 792 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 MAT2AP31153 395 aaKnown RBP11.5□□□□□ -0.57
SORT1-204ENST00000482236 CCT8P50990 548 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 GEMIN4P57678 1058 aaKnown RBP11.5□□□□□ -0.57
SORT1-204ENST00000482236 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
SORT1-204ENST00000482236 KLHL30Q0D2K2 578 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 HNRNPDQ14103 355 aaKnown RBP11.5□□□□□ -0.57
SORT1-204ENST00000482236 POLD3Q15054 466 aaPredicted RBP11.5□□□□□ -0.57
SORT1-204ENST00000482236 OTUD1Q5VV17 481 aaPredicted RBP11.5□□□□□ -0.57
SORT1-204ENST00000482236 DPY19L2P1Q6NXN4 242 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 LAYNQ6UX15 382 aa11.5□□□□□ -0.57
SORT1-204ENST00000482236 STRADAQ7RTN6 431 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms