RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RFC1P35251 1148 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 PSMC2P35998 433 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 PRKCIP41743 596 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 ALDH18A1P54886 795 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 CSE1LP55060 971 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 HDAC4P56524 1084 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 MVKQ03426 396 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 NFIL3Q16649 462 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TTC39AQ5SRH9 613 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 MCTP2Q6DN12 878 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 DGAT2L7PQ6IED9 249 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 ARHGAP27Q6ZUM4 889 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 RBM17Q96I25 401 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 ERVMER34-1Q9H9K5 563 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TMOD3Q9NYL9 352 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TAS2R10Q9NYW0 307 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 DNAI1Q9UI46 699 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 HACL1Q9UJ83 578 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 IL16Q14005 1332 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 NPHS1O60500 1241 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 GPR32O75388 356 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 PTBP3O95758 552 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 GLP2RO95838 553 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TGFB1P01137 390 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 SNRPA1P09661 255 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 H2AFB1P0C5Y9 115 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 H2AFB2P0C5Z0 115 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 FAHP16930 419 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 ACVR2AP27037 513 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TIRAPP58753 221 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 ZNF200P98182 395 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 YWHAHQ04917 246 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 KCNMA1Q12791 1236 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 ITGA7Q13683 1181 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 MSMPQ1L6U9 139 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 PLEKHO1Q53GL0 409 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 ARL6IP4Q66PJ3 421 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 KIAA0930Q6ICG6 404 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 NAPEPLDQ6IQ20 393 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 LIPIQ6XZB0 460 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 FRMD5Q7Z6J6 570 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TAGAPQ8N103 731 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 PQLC1Q8N2U9 271 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 SCFD2Q8WU76 684 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 BCL7CQ8WUZ0 217 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 SPATA17Q96L03 361 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 FSD1Q9BTV5 496 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 REXO4Q9GZR2 422 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 ZCWPW1Q9H0M4 648 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 PALD1Q9ULE6 856 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 ZBTB1Q9Y2K1 713 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 OBSL1O75147 1896 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TRAV34A0A0B4J273 112 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 FAM171A2A8MVW0 826 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 DIAPH2O60879 1101 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 NME6O75414 186 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 BBOX1O75936 387 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 DDAH2O95865 285 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 INHBAP08476 426 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 GABRB1P18505 474 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 CDKN1AP38936 164 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 KCNJ1P48048 391 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 PTDSS1P48651 473 aaKnown RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 RAB39AQ14964 217 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 TAF7Q15545 349 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 PTCHD3Q3KNS1 767 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 ATPAF1Q5TC12 328 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 FAXCQ5TGI0 409 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 MROH9Q5TGP6 573 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 C16orf87Q6PH81 154 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 FBXO46Q6PJ61 603 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 MIB1Q86YT6 1006 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMC6-208ENST00000481708 TMIEQ8NEW7 156 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 OR5AN1Q8NGI8 311 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 CRACR2AQ9BSW2 395 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 RABEP2Q9H5N1 569 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 EXOC7Q9UPT5 735 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 KCNE2Q9Y6J6 123 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 NUP210Q8TEM1 1887 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 LOC105369274A0A096LPK9 316 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 GPR75-ASB3A0A0A6YYF3 556 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 LOC102723532A0A0G2JNH3 316 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 A0A1W2PR77 199 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 HGSO14964 777 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 PRPSAP2O60256 369 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 TADA2AO75478 443 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 IFNB1P01574 187 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 SDHBP21912 280 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 EPHX2P34913 555 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 CPA2P48052 419 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 TKTL1P51854 596 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 TTC31Q49AM3 519 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 MON1AQ86VX9 555 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMC6-208ENST00000481708 OR4N4Q8N0Y3 316 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 BICD2Q8TD16 824 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 LINC01599Q8WXQ3 324 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 MRPS27Q92552 414 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms