RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
NDC1-202ENST00000480952 TP53BP1Q12888 1972 aaPredicted RBP13.8□□□□□ -0.2
NDC1-202ENST00000480952 PIAS2O75928 621 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
NDC1-202ENST00000480952 LTFP02788 710 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 GIMD1P0DJR0 217 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 ZNF18P17022 549 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 ME1P48163 572 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 RGS7P49802 495 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 MXI1P50539 228 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 SRSF1Q07955 248 aaKnown RBP eCLIP13.79□□□□□ -0.2
NDC1-202ENST00000480952 CNTN1Q12860 1018 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 ADAM9Q13443 819 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 ACCSLQ4AC99 568 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 LURAP1LQ8IV03 231 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 IFI44Q8TCB0 444 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 FAM131CQ96AQ9 280 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 FCRL2Q96LA5 508 aaPredicted RBP13.79□□□□□ -0.2
NDC1-202ENST00000480952 DUSP23Q9BVJ7 150 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 TRIM4Q9C037 500 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 USP29Q9HBJ7 922 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 PREBQ9HCU5 417 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 WDR70Q9NW82 654 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 SARDHQ9UL12 918 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 PIEZO2Q9H5I5 2752 aa13.79□□□□□ -0.2
NDC1-202ENST00000480952 C1QTNF3-AMACRE9PGA6 284 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 VDRP11473 427 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 PRLRP16471 622 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 SULT2A1Q06520 285 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 NFIL3Q16649 462 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 AGBL4Q5VU57 503 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 RESP18Q5W5W9 173 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 FOXR1Q6PIV2 292 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 IGF2-ASQ6U949 168 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 TMEM145Q8NBT3 493 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 FRS2Q8WU20 508 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 KLK6Q92876 244 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 GRAMD1AQ96CP6 724 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 ATXN7L3BQ96GX2 97 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 SERPINB11Q96P15 392 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.78□□□□□ -0.2
NDC1-202ENST00000480952 TJP2Q9UDY2 1190 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 KIAA1257Q9ULG3 409 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 PPM1HQ9ULR3 514 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 PCDHA7Q9UN72 937 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 MAPK8IP1Q9UQF2 711 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 TLR6Q9Y2C9 796 aa13.78□□□□□ -0.2
NDC1-202ENST00000480952 A0A1W2PQU0 124 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 K7ESM1 405 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 O00370 1275 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 SCAMP1O15126 338 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 STX10O60499 249 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 GABBR2O75899 941 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 PDGFRAP16234 1089 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 TGM2P21980 687 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 AKT2P31751 481 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
NDC1-202ENST00000480952 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
NDC1-202ENST00000480952 CUL2Q13617 745 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 SLC12A1Q13621 1099 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 ARL13BQ3SXY8 428 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 COLEC12Q5KU26 742 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 C6orf132Q5T0Z8 1188 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 RAP1GAP2Q684P5 730 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 PMF1Q6P1K2 205 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 ARL14Q8N4G2 192 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 EXD3Q8N9H8 876 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 OR13H1Q8NG92 308 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 DQX1Q8TE96 717 aaKnown RBP13.77□□□□□ -0.21
NDC1-202ENST00000480952 CLEC4CQ8WTT0 213 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 SLC35F5Q8WV83 523 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 EEF2KMTQ96G04 330 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 INTS4Q96HW7 963 aaKnown RBP13.77□□□□□ -0.21
NDC1-202ENST00000480952 CAAP1Q9H8G2 361 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 FZD3Q9NPG1 666 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 DNAJC28Q9NX36 388 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 XPO7Q9UIA9 1087 aaKnown RBP13.77□□□□□ -0.21
NDC1-202ENST00000480952 PCDHGA8Q9Y5G5 932 aa13.77□□□□□ -0.21
NDC1-202ENST00000480952 LY6G6EA0A0G2JKS1 128 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 A0A1W2PNU3 283 aaPredicted RBP13.76□□□□□ -0.21
NDC1-202ENST00000480952 CPED1A4D0V7 1026 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 ACTN4O43707 911 aaKnown RBP13.76□□□□□ -0.21
NDC1-202ENST00000480952 BNIP3LO60238 219 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 NEBLO76041 1014 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 FBXO21O94952 628 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 APOEP02649 317 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 TACR2P21452 398 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 SKOR1P84550 965 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 CCDC15Q0P6D6 951 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 CDKN3Q16667 212 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 FOXD4L6Q3SYB3 417 aaPredicted RBP13.76□□□□□ -0.21
NDC1-202ENST00000480952 LCLAT1Q6UWP7 414 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 FOXD4L3Q6VB84 417 aaPredicted RBP13.76□□□□□ -0.21
NDC1-202ENST00000480952 CHSY1Q86X52 802 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 CCDC47Q96A33 483 aaKnown RBP13.76□□□□□ -0.21
NDC1-202ENST00000480952 IFT43Q96FT9 208 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms