RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 CORO1BQ9BR76 489 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 OAZ2O95190 189 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 ALOX15P16050 662 aaPredicted RBP17.19■□□□□ 0.34
SH3D21-203ENST00000480549 PGFP49763 221 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 SH2D4BQ5SQS7 431 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 C4orf50Q6ZRC1 276 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 COLGALT1Q8NBJ5 622 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 LRRC39Q96DD0 335 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 SMC6Q96SB8 1091 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 ZC3H7BQ9UGR2 993 aaKnown RBP17.19■□□□□ 0.34
SH3D21-203ENST00000480549 SUN2Q9UH99 717 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 SLC4A7Q9Y6M7 1214 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 OPHN1O60890 802 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 NBNO60934 754 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 ASMTLO95671 621 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 FDFT1P37268 417 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 OR1G1P47890 313 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 CDK7P50613 346 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 MPP5Q8N3R9 675 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 WDR60Q8WVS4 1066 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 SLC44A1Q8WWI5 657 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 GATA6Q92908 595 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 TBC1D10AQ9BXI6 508 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 CEP41Q9BYV8 373 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 MYLK2Q9H1R3 596 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 SMG5Q9UPR3 1016 aaKnown RBP17.18■□□□□ 0.34
SH3D21-203ENST00000480549 WDR37Q9Y2I8 494 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 TTC3P53804 2025 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 SELPP16109 830 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 GRK4P32298 578 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 STX2P32856 288 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 PARP6Q2NL67 630 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 SLC39A12Q504Y0 691 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 CCDC92Q53HC0 331 aaPredicted RBP17.18■□□□□ 0.34
SH3D21-203ENST00000480549 MAGEB18Q96M61 343 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 SSU72Q9NP77 194 aaKnown RBP17.18■□□□□ 0.34
SH3D21-203ENST00000480549 TMEM161AQ9NX61 479 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 HSFX1Q9UBD0 423 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 ITGA2BP08514 1039 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 GRIK1P39086 918 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 RCN1Q15293 331 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 KHDC1Q4VXA5 237 aaKnown RBP17.18■□□□□ 0.34
SH3D21-203ENST00000480549 NCCRP1Q6ZVX7 275 aaPredicted RBP17.18■□□□□ 0.34
SH3D21-203ENST00000480549 ZNF567Q8N184 647 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 CCNYQ8ND76 341 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 DTX3LQ8TDB6 740 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 NRG4Q8WWG1 115 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 ERP27Q96DN0 273 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 DNAJC1Q96KC8 554 aaKnown RBP17.18■□□□□ 0.34
SH3D21-203ENST00000480549 KANSL3Q9P2N6 904 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 OR12D3Q9UGF7 316 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 PRG3Q9Y2Y8 225 aaPredicted RBP17.18■□□□□ 0.34
SH3D21-203ENST00000480549 RAD54BQ9Y620 910 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 COMMD3-BMI1R4GMX3 469 aa17.18■□□□□ 0.34
SH3D21-203ENST00000480549 F5H423 210 aaPredicted RBP17.17■□□□□ 0.34
SH3D21-203ENST00000480549 RPA3P35244 121 aaPredicted RBP17.17■□□□□ 0.34
SH3D21-203ENST00000480549 DUS1LQ6P1R4 473 aaKnown RBP17.17■□□□□ 0.34
SH3D21-203ENST00000480549 TRIM56Q9BRZ2 755 aaKnown RBP17.17■□□□□ 0.34
SH3D21-203ENST00000480549 DCLRE1BQ9H816 532 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 XAB2Q9HCS7 855 aaKnown RBP17.17■□□□□ 0.34
SH3D21-203ENST00000480549 NEU3Q9UQ49 428 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 ZNF711Q9Y462 761 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 LRIG2O94898 1065 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 ASLP04424 464 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 KRT4P19013 534 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 PRKCHP24723 683 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 FOXN2P32314 431 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 BTG3Q14201 252 aaPredicted RBP17.17■□□□□ 0.34
SH3D21-203ENST00000480549 UNC5AQ6ZN44 842 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 SCD5Q86SK9 330 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 SMYD1Q8NB12 490 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 NCSTNQ92542 709 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 EBNA1BP2Q99848 306 aaKnown RBP17.17■□□□□ 0.34
SH3D21-203ENST00000480549 TRIM62Q9BVG3 475 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 EIF2B3Q9NR50 452 aaKnown RBP17.17■□□□□ 0.34
SH3D21-203ENST00000480549 GRID1Q9ULK0 1009 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 SHROOM3Q8TF72 1996 aa17.17■□□□□ 0.34
SH3D21-203ENST00000480549 A0A0J9YVX5 310 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 STK10O94804 968 aaKnown RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 SERPINB3P29508 390 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 ZNF135P52742 658 aaPredicted RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 IFRD2Q12894 506 aaPredicted RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 LIN52Q52LA3 116 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 FAM126BQ8IXS8 530 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 ZNF296Q8WUU4 475 aaPredicted RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 NMD3Q96D46 503 aaKnown RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 LRMDAQ9H2I8 198 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 ARHGEF38Q9NXL2 777 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 SEPT10Q9P0V9 454 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 IRAK2O43187 625 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 COL6A1P12109 1028 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 PSMB4P28070 264 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 SKIV2L2P42285 1042 aaKnown RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 CDK16Q00536 496 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 PPIDQ08752 370 aaKnown RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 PDCD7Q8N8D1 485 aaKnown RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 MPP4Q96JB8 637 aa17.16■□□□□ 0.34
SH3D21-203ENST00000480549 TGS1Q96RS0 853 aaKnown RBP17.16■□□□□ 0.34
SH3D21-203ENST00000480549 SMYD2Q9NRG4 433 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms