RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 HAPLN3Q96S86 360 aa15.76■□□□□ 0.11
CDK9-203ENST00000480353 TMEM59LQ9UK28 342 aa15.76■□□□□ 0.11
CDK9-203ENST00000480353 ANGPTL2Q9UKU9 493 aa15.76■□□□□ 0.11
CDK9-203ENST00000480353 SNX10Q9Y5X0 201 aa15.76■□□□□ 0.11
CDK9-203ENST00000480353 ASCC3Q8N3C0 2202 aaKnown RBP15.75■□□□□ 0.11
CDK9-203ENST00000480353 PCDH15Q96QU1 1955 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 SPTBN2O15020 2390 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 CNTN5O94779 1100 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 KRT3P12035 628 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 FERP16591 822 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 C5AR1P21730 350 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 IRAK1P51617 712 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 OTUD1Q5VV17 481 aaPredicted RBP15.75■□□□□ 0.11
CDK9-203ENST00000480353 KIAA0895LQ68EN5 471 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 ARCQ7LC44 396 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 TFAP2DQ7Z6R9 452 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 SETD3Q86TU7 594 aaPredicted RBP15.75■□□□□ 0.11
CDK9-203ENST00000480353 ATP11CQ8NB49 1132 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 OR2I1PQ8NGU4 316 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 OR14C36Q8NHC7 312 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 RXFP2Q8WXD0 754 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 PTPRN2Q92932 1015 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 SKA1Q96BD8 255 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 C1orf74Q96LT6 269 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 BPIFA3Q9BQP9 254 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 MPP6Q9NZW5 540 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.75■□□□□ 0.11
CDK9-203ENST00000480353 DOCK4Q8N1I0 1966 aa15.75■□□□□ 0.11
CDK9-203ENST00000480353 LAMA1P25391 3075 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 CNOT1A5YKK6 2376 aaKnown RBP15.74■□□□□ 0.11
CDK9-203ENST00000480353 LRRC10BA6NIK2 292 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 GIPC1O14908 333 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 SERPINC1P01008 464 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 ATP1A3P13637 1013 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 CHRNB2P17787 502 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 TNFAIP3P21580 790 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 CD27P26842 260 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 RECQLP46063 649 aaPredicted RBP15.74■□□□□ 0.11
CDK9-203ENST00000480353 ZNF165P49910 485 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 C21orf59P57076 290 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 FOXC1Q12948 553 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 NCAPHQ15003 741 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 DLG2Q15700 870 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 CLEC16AQ2KHT3 1053 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 C15orf59Q2T9L4 293 aaPredicted RBP15.74■□□□□ 0.11
CDK9-203ENST00000480353 C5orf22Q49AR2 442 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 ALFQ53S48 1182 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 RWDD4Q6NW29 188 aaKnown RBP15.74■□□□□ 0.11
CDK9-203ENST00000480353 DNAJC24Q6P3W2 148 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 BIRC7Q96CA5 298 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 AGPAT1Q99943 283 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 SPON2Q9BUD6 331 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 ADAM33Q9BZ11 813 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 ZYG11BQ9C0D3 744 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 NEUROG2Q9H2A3 272 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 GAREM1Q9H706 876 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 DNAAF2Q9NVR5 837 aaKnown RBP15.74■□□□□ 0.11
CDK9-203ENST00000480353 FZD4Q9ULV1 537 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D30Q9Y2I9 924 aa15.74■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3DA0A087WVF3 549 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3IA0A087WXS9 549 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3EA0A087X179 549 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3KA0A087X1G2 549 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3FA6NER0 549 aaPredicted RBP15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3LB9A6J9 549 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3HP0C7X1 549 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 UNGP13051 313 aaPredicted RBP15.73■□□□□ 0.11
CDK9-203ENST00000480353 VAV1P15498 845 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 GOT1P17174 413 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 GPD1P21695 349 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 CSNK1EP49674 416 aaKnown RBP15.73■□□□□ 0.11
CDK9-203ENST00000480353 CCDC15Q0P6D6 951 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 SEMA3BQ13214 749 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 SLC14A1Q13336 389 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 HNRNPDQ14103 355 aaKnown RBP15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3GQ6DHY5 549 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3CQ6IPX1 549 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 PPP1R2P3Q6NXS1 205 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 NCEH1Q6PIU2 408 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.73■□□□□ 0.11
CDK9-203ENST00000480353 TBC1D3Q8IZP1 549 aaPredicted RBP15.73■□□□□ 0.11
CDK9-203ENST00000480353 SH2D3CQ8N5H7 860 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 OR2T34Q8NGX1 318 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 SETD7Q8WTS6 366 aaKnown RBP15.73■□□□□ 0.11
CDK9-203ENST00000480353 FAM129BQ96TA1 746 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 DYRK4Q9NR20 520 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 TMPRSS4Q9NRS4 437 aa15.73■□□□□ 0.11
CDK9-203ENST00000480353 A0A1B0GVT2 93 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 DRGXA6NNA5 263 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 UPK3BL1B0FP48 263 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 UPK3BL2E5RIL1 263 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 CBX4O00257 560 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 ALOX15BO15296 676 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 ATP9BO43861 1147 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 PTMSP20962 102 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 VASPP50552 380 aaPredicted RBP15.72■□□□□ 0.11
CDK9-203ENST00000480353 GALCP54803 685 aa15.72■□□□□ 0.11
CDK9-203ENST00000480353 SIM1P81133 766 aaPredicted RBP15.72■□□□□ 0.11
CDK9-203ENST00000480353 SUZ12Q15022 739 aaKnown RBP15.72■□□□□ 0.11
CDK9-203ENST00000480353 CCDC14Q49A88 953 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms