RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 YBEYP58557 167 aaPredicted RBP20.24■□□□□ 0.83
LIME1-205ENST00000480139 ECT2LQ008S8 904 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 CCDC173Q0VFZ6 552 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 KRT81Q14533 505 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 ATP13A4Q4VNC1 1196 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 SORCS1Q8WY21 1168 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 CSPG4P5Q96PW8 444 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 ZNF670Q9BS34 389 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 KCNH6Q9H252 994 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 DNAI1Q9UI46 699 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 CKAP5Q14008 2032 aa20.24■□□□□ 0.83
LIME1-205ENST00000480139 A0A0D9SEW6 157 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 A0A0U1RQJ8 604 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 RAMP2O60895 175 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 ERCC2P18074 760 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 HOXA6P31267 233 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 GJC1P36383 396 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 IL12RB1P42701 662 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 NDST2P52849 883 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 NAP1L1P55209 391 aaKnown RBP20.23■□□□□ 0.83
LIME1-205ENST00000480139 SATB1Q01826 763 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 DPYSL3Q14195 570 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 PARP15Q460N3 678 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 MAML2Q8IZL2 1156 aaPredicted RBP20.23■□□□□ 0.83
LIME1-205ENST00000480139 CCDC33Q8N5R6 958 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 CAMKK1Q8N5S9 505 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 LRRC57Q8N9N7 239 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 KCTD6Q8NC69 237 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 ATRIPQ8WXE1 791 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 MYO19Q96H55 970 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 MRGPRX3Q96LB0 322 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 ACOX2Q99424 681 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 PSMB7Q99436 277 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 ACE2Q9BYF1 805 aaPredicted RBP20.23■□□□□ 0.83
LIME1-205ENST00000480139 TMEM245Q9H330 911 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 CACNA2D2Q9NY47 1150 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 DDX56Q9NY93 547 aaKnown RBP20.23■□□□□ 0.83
LIME1-205ENST00000480139 TRIM10Q9UDY6 481 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 ERVW-1Q9UQF0 538 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 STON1Q9Y6Q2 735 aa20.23■□□□□ 0.83
LIME1-205ENST00000480139 CACNA1IQ9P0X4 2223 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 MACROD2A1Z1Q3 448 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 GRID2IPA4D2P6 1211 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 IL4RP24394 825 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 DGKEP52429 567 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 ST8SIA6P61647 398 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 POLD3Q15054 466 aaPredicted RBP20.22■□□□□ 0.83
LIME1-205ENST00000480139 CRY1Q16526 586 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 LZTR1Q8N653 840 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 KIAA1524Q8TCG1 905 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 CYB5D2Q8WUJ1 264 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 ARHGEF2Q92974 986 aaKnown RBP20.22■□□□□ 0.83
LIME1-205ENST00000480139 FAF2Q96CS3 445 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 KCNF1Q9H3M0 494 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 GOLPH3Q9H4A6 298 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 NOL6Q9H6R4 1146 aaKnown RBP20.22■□□□□ 0.83
LIME1-205ENST00000480139 ZDHHC4Q9NPG8 344 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 C2orf42Q9NWW7 574 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 SLC8A2Q9UPR5 921 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 HYOU1Q9Y4L1 999 aa20.22■□□□□ 0.83
LIME1-205ENST00000480139 K7ESF4 209 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 DCLK1O15075 740 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 CD48P09326 243 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 TDGF1P13385 188 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 HOXB2P14652 356 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 KDELR1P24390 212 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 CTSOP43234 321 aaPredicted RBP20.21■□□□□ 0.83
LIME1-205ENST00000480139 ANGPT1Q15389 498 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 ZNF528Q3MIS6 628 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 FNDC3BQ53EP0 1204 aaKnown RBP20.21■□□□□ 0.83
LIME1-205ENST00000480139 AFMIDQ63HM1 303 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 SERPINA13PQ6UXR4 307 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 SYCE1Q8N0S2 351 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 OR7D4Q8NG98 312 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 UBE2Q2Q8WVN8 375 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 CALN1Q9BXU9 219 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 KLC2Q9H0B6 622 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 LRRC19Q9H756 370 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 CD248Q9HCU0 757 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 ATP13A1Q9HD20 1204 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 VPS51Q9UID3 782 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 SLC25A13Q9UJS0 675 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 HS3ST2Q9Y278 367 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 PPP2R2CQ9Y2T4 447 aa20.21■□□□□ 0.83
LIME1-205ENST00000480139 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.21■□□□□ 0.83
LIME1-205ENST00000480139 NYNRINQ9P2P1 1898 aaKnown RBP20.21■□□□□ 0.83
LIME1-205ENST00000480139 A0A1W2PQF6 199 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 ZMPSTE24O75844 475 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 CTNNA1P35221 906 aaKnown RBP20.2■□□□□ 0.82
LIME1-205ENST00000480139 NNMTP40261 264 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 RETSATQ6NUM9 610 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 TMCO3Q6UWJ1 677 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 TMEM92Q6UXU6 159 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 KATNAL2Q8IYT4 538 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 RAPGEF5Q92565 580 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 FAM126AQ9BYI3 521 aaPredicted RBP20.2■□□□□ 0.82
LIME1-205ENST00000480139 PRDM16Q9HAZ2 1276 aa20.2■□□□□ 0.82
LIME1-205ENST00000480139 POLMQ9NP87 494 aaPredicted RBP20.2■□□□□ 0.82
LIME1-205ENST00000480139 LRRD1A4D1F6 860 aa20.19■□□□□ 0.82
LIME1-205ENST00000480139 C3orf70A6NLC5 250 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms