RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CYP46A1Q9Y6A2 500 aa12.32□□□□□ -0.44
USP11-208ENST00000480104 A0A1W2PQM1 296 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 H3BM21 787 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 TPP1O14773 563 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 SLC7A4O43246 635 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 PRPF6O94906 941 aaKnown RBP12.31□□□□□ -0.44
USP11-208ENST00000480104 RPLP0P05388 317 aaKnown RBP12.31□□□□□ -0.44
USP11-208ENST00000480104 AKT2P31751 481 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 GUCY1B3Q02153 619 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 SEPT6Q14141 434 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 Q6ZSR6 202 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 ASB18Q6ZVZ8 466 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 ABI3BPQ7Z7G0 1075 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 CCDC74AQ96AQ1 378 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 CPEB1Q9BZB8 566 aaKnown RBP12.31□□□□□ -0.44
USP11-208ENST00000480104 SMYD3Q9H7B4 428 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 PPM1HQ9ULR3 514 aa12.31□□□□□ -0.44
USP11-208ENST00000480104 HHLA1C9JL84 531 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
USP11-208ENST00000480104 FAM163BP0C2L3 166 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 RALAP11233 206 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 HNRNPA2B1P22626 353 aaKnown RBP12.3□□□□□ -0.44
USP11-208ENST00000480104 OAS2P29728 719 aaKnown RBP12.3□□□□□ -0.44
USP11-208ENST00000480104 NOS2P35228 1153 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 CTSOP43234 321 aaPredicted RBP12.3□□□□□ -0.44
USP11-208ENST00000480104 KCNA1Q09470 495 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 CNTN1Q12860 1018 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 ELAVL3Q14576 367 aaKnown RBP12.3□□□□□ -0.44
USP11-208ENST00000480104 BMT2Q1RMZ1 405 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 WDR72Q3MJ13 1102 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 TCTN3Q6NUS6 607 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 PARGQ86W56 976 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 SLC2A14Q8TDB8 520 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 GPBAR1Q8TDU6 330 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 TMEM159Q96B96 161 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 TMA16Q96EY4 203 aaKnown RBP12.3□□□□□ -0.44
USP11-208ENST00000480104 CGRRF1Q99675 332 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 GPR27Q9NS67 375 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 MARCH2Q9P0N8 246 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 INTS6Q9UL03 887 aaKnown RBP12.3□□□□□ -0.44
USP11-208ENST00000480104 ENTPD4Q9Y227 616 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 MAP4K5Q9Y4K4 846 aa12.3□□□□□ -0.44
USP11-208ENST00000480104 PCSK5Q92824 1860 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 A0A1W2PQU0 124 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 A6NNZ2 444 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 TCP11X1B4DZS4 312 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 ASLP04424 464 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 VAV1P15498 845 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 JUNDP17535 347 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 ARSDP51689 593 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 TAS2R38P59533 333 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 ZFP36L1Q07352 338 aaKnown RBP12.29□□□□□ -0.44
USP11-208ENST00000480104 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 ZNF284Q2VY69 593 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 TMEM119Q4V9L6 283 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 TMEM164Q5U3C3 297 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 ACOT1Q86TX2 421 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 KDM1BQ8NB78 822 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 SLC45A3Q96JT2 553 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 LMLNQ96KR4 655 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 CDK5RAP1Q96SZ6 601 aaKnown RBP12.29□□□□□ -0.44
USP11-208ENST00000480104 CMKLR1Q99788 373 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 CBWD1Q9BRT8 395 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 ST6GALNAC4Q9H4F1 302 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 SLCO3A1Q9UIG8 710 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 STRIP2Q9ULQ0 834 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 ERVW-1Q9UQF0 538 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 PCDHA5Q9Y5H7 936 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 STAB1Q9NY15 2570 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 ITIH6Q6UXX5 1313 aa12.29□□□□□ -0.44
USP11-208ENST00000480104 SPTY2D1-AS1A0A0U1RR47 76 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 GCATO75600 419 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 CST3P01034 146 aaPredicted RBP12.28□□□□□ -0.44
USP11-208ENST00000480104 UGT1A3P35503 534 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 PSEN1P49768 467 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 ATP1A1-AS1Q5TC04 95 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 TRAPPC11Q7Z392 1133 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 CACNA2D3Q8IZS8 1091 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 RBFAQ8N0V3 343 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 KYQ8NBH2 561 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 PMEPA1Q969W9 287 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 PLD4Q96BZ4 506 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 CDK5RAP3Q96JB5 506 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 TNIP3Q96KP6 325 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 B3GNT4Q9C0J1 378 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 CDH19Q9H159 772 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 PDRG1Q9NUG6 133 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 FAM49BQ9NUQ9 324 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 CLIC5Q9NZA1 410 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 GGT7Q9UJ14 662 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 SARDHQ9UL12 918 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 PHTF1Q9UMS5 762 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 KIF3AQ9Y496 699 aa12.28□□□□□ -0.44
USP11-208ENST00000480104 MKRN2OSH3BPM6 223 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 JAK2O60674 1132 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 TBL1XO60907 577 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 PPP1R37O75864 691 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 LDHAP00338 332 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms