RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 ZNF286BP0CG31 522 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 PTPN7P35236 360 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 CYP2J2P51589 502 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 NFX1Q12986 1120 aaKnown RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 BFSP2Q13515 415 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 PDPK2PQ6A1A2 396 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 TMEM174Q8WUU8 243 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 SCLYQ96I15 445 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 COG8Q96MW5 612 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 FAM118BQ9BPY3 351 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 SENP7Q9BQF6 1050 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 FRMD8P1Q9BZ68 369 aaPredicted RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 COPS7BQ9H9Q2 264 aaPredicted RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 SLITRK3O94933 977 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 COX4I1P13073 169 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 ZNF26P17031 533 aaPredicted RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 MXI1P50539 228 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 BMXP51813 675 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 PSMC1P62191 440 aaKnown RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 MRPS22P82650 360 aaKnown RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 CYP2A13Q16696 494 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 UBE2SQ16763 222 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 AGAP7PQ5VUJ5 663 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 LYSMD3Q7Z3D4 306 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 SETD3Q86TU7 594 aaPredicted RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 SLC47A2Q86VL8 602 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 MMAAQ8IVH4 418 aaKnown RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 FIBCD1Q8N539 461 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 NAT8LQ8N9F0 302 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 TFB1MQ8WVM0 346 aaKnown RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 CLIP3Q96DZ5 547 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 C16orf70Q9BSU1 422 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 TTYH1Q9H313 450 aaPredicted RBP13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 PNPLA8Q9NP80 782 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 OLAHQ9NV23 265 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 RIC8BQ9NVN3 520 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 RAB20Q9NX57 234 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 NOD1Q9Y239 953 aa13.42□□□□□ -0.26
CNKSR3-204ENST00000479339 RGS13O14921 159 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 KMOO15229 486 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 ATE1O95260 518 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 IQCF3P0C7M6 154 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 NMT1P30419 496 aaKnown RBP13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 LSM12Q3MHD2 195 aaKnown RBP13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 STXBP5Q5T5C0 1151 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 FRMD7Q6ZUT3 714 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 MCOLN2Q8IZK6 566 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 LILRA2Q8N149 483 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 C7orf31Q8N865 590 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 TMEM102Q8N9M5 508 aaPredicted RBP13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 CALML6Q8TD86 181 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 USP33Q8TEY7 942 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 GPRASP2Q96D09 838 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 ZNF512Q96ME7 567 aaPredicted RBP13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 PKP2Q99959 881 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 MECRQ9BV79 373 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 FRMD8Q9BZ67 464 aaPredicted RBP13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 TMEM117Q9H0C3 514 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 BCAS3Q9H6U6 928 aa13.41□□□□□ -0.26
CNKSR3-204ENST00000479339 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 SPATA31C1P0DKV0 1188 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 VAMP7P51809 220 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 NLRP11P59045 1033 aaKnown RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 DMPKQ09013 629 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CBLBQ13191 982 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 E2F2Q14209 437 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 FAM209AQ5JX71 171 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 FNBP1LQ5T0N5 605 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 BNC2Q6ZN30 1099 aaPredicted RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CDHR3Q6ZTQ4 885 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 RNF169Q8NCN4 708 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 DHX38Q92620 1227 aaKnown RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CCDC127Q96BQ5 260 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CDHR1Q96JP9 859 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 TMEM79Q9BSE2 394 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 EHMT1Q9H9B1 1298 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CXorf21Q9HAI6 301 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CXXC1Q9P0U4 656 aaPredicted RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 DAPK2Q9UIK4 370 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 UBIAD1Q9Y5Z9 338 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 A0A1B0GTW7 788 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CCDC195A0A1B0GUA6 201 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 TRIM64A6NGJ6 449 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 ZNF839A8K0R7 811 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 TRIM49D1C9J1S8 452 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 BANF1O75531 89 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 APOEP02649 317 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 P4HA1P13674 534 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 ETS1P14921 441 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 ENDOUP21128 410 aaKnown RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 DNAJB2P25686 324 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CRHR1P34998 444 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 GNL1P36915 607 aaPredicted RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 GALNT2Q10471 571 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms