RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ST8SIA6P61647 398 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 ZNF284Q2VY69 593 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 BHLHA9Q7RTU4 235 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 ZNF276Q8N554 614 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 PLD4Q96BZ4 506 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 TNIP3Q96KP6 325 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 CGRRF1Q99675 332 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 BOCQ9BWV1 1114 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 STIM2Q9P246 746 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 PNMA8BQ9ULN7 279 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-217ENST00000478743 ZFR2Q9UPR6 939 aaKnown RBP12.66□□□□□ -0.38
HDAC8-217ENST00000478743 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 USP3Q9Y6I4 520 aa12.66□□□□□ -0.38
HDAC8-217ENST00000478743 A0A1W2PQU0 124 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 TARSL2A2RTX5 802 aaKnown RBP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 ZNF233A6NK53 670 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 RNF103O00237 685 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 AQP9O43315 295 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 GCATO75600 419 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 CSF2P04141 144 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 CELA2BP08218 269 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 NME1P15531 152 aaKnown RBP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 HNRNPKP61978 463 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 CCL7P80098 99 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 C1orf61Q13536 156 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 LACTB2Q53H82 288 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 PITRM1Q5JRX3 1037 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 Q6ZSR6 202 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 PTAR1Q7Z6K3 402 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 SDR16C5Q8N3Y7 309 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 LMX1AQ8TE12 382 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 PDCD6IPQ8WUM4 868 aaKnown RBP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
HDAC8-217ENST00000478743 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 SFMBT1Q9UHJ3 866 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 SALL4Q9UJQ4 1053 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 STOML2Q9UJZ1 356 aa12.65□□□□□ -0.38
HDAC8-217ENST00000478743 TNRC6AQ8NDV7 1962 aaKnown RBP12.64□□□□□ -0.39
HDAC8-217ENST00000478743 POM121BA6NF01 834 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 SPINT1O43278 529 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 PRKAR1AP10644 381 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 TNNI1P19237 187 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 NUDT1P36639 197 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 CASP4P49662 377 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 KLRB1Q12918 225 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 EIF3IQ13347 325 aaKnown RBP12.64□□□□□ -0.39
HDAC8-217ENST00000478743 FGL2Q14314 439 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 FAM133BQ5BKY9 247 aaKnown RBP12.64□□□□□ -0.39
HDAC8-217ENST00000478743 PIK3R6Q5UE93 754 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 NUGGCQ68CJ6 796 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 SEL1L3Q68CR1 1132 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 MFN1Q8IWA4 741 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 APCDD1Q8J025 514 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 PLEKHO2Q8TD55 490 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 CCDC74AQ96AQ1 378 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 DNAJC19Q96DA6 116 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 TCTN2Q96GX1 697 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 BMFQ96LC9 184 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 CASS4Q9NQ75 786 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 MED13LQ71F56 2210 aa12.64□□□□□ -0.39
HDAC8-217ENST00000478743 A0A1W2PQ27 194 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 A0A1W2PQ64 194 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 A0A1W2PQC6 194 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 RAD51BO15315 384 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 NKX2-8O15522 239 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 SLC7A4O43246 635 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 KIF20AO95235 890 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 VNN1O95497 513 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 ASLP04424 464 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 RPLP0P05388 317 aaKnown RBP12.63□□□□□ -0.39
HDAC8-217ENST00000478743 CCKBRP32239 447 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 HOXD13P35453 343 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 PSEN1P49768 467 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 RPS24P62847 133 aaKnown RBP12.63□□□□□ -0.39
HDAC8-217ENST00000478743 ELAVL3Q14576 367 aaKnown RBP12.63□□□□□ -0.39
HDAC8-217ENST00000478743 ESPL1Q14674 2120 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 BMT2Q1RMZ1 405 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 ADGRF1Q5T601 910 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 PIP5KL1Q5T9C9 394 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 ATP1A1-AS1Q5TC04 95 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 NADSYN1Q6IA69 706 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 CRYBG2Q8N1P7 616 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 KYQ8NBH2 561 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 NKD1Q969G9 470 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 IFT43Q96FT9 208 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 GFM1Q96RP9 751 aaKnown RBP12.63□□□□□ -0.39
HDAC8-217ENST00000478743 STRIP2Q9ULQ0 834 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 PCDHB11Q9Y5F2 797 aa12.63□□□□□ -0.39
HDAC8-217ENST00000478743 A0A087X0B3 334 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 A0A1B0GTL3 188 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 VPS4BO75351 444 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 HNRNPA2B1P22626 353 aaKnown RBP12.62□□□□□ -0.39
HDAC8-217ENST00000478743 YWHAGP61981 247 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDAC8-217ENST00000478743 CYP24A1Q07973 514 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 EIF2B5Q13144 721 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms