RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 DAPK3O43293 454 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SNAP91O60641 907 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PROSCO94903 275 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NDUFA10O95299 355 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ASLP04424 464 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 RHOQP17081 205 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 GOT1P17174 413 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 GLDCP23378 1020 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 L1CAMP32004 1257 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PCK1P35558 622 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NOP2P46087 812 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 OXCT1P55809 520 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NRG1Q02297 640 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SLC25A11Q02978 314 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SLC12A1Q13621 1099 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ACAP1Q15027 740 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 E2F5Q15329 346 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ZFYVE27Q5T4F4 411 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ARTNQ5T4W7 220 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 TXNRD3NBQ6F5E7 133 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 KIAA1324Q6UXG2 1013 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 RAD9BQ6WBX8 426 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PRR23BQ6ZRT6 265 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SETD3Q86TU7 594 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 LONP2Q86WA8 852 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 RHOT2Q8IXI1 618 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 CAMKK1Q8N5S9 505 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NIPA2Q8N8Q9 360 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ACRBPQ8NEB7 543 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 OR7D4Q8NG98 312 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 RFFLQ8WZ73 363 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 TTC17Q96AE7 1141 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SPON2Q9BUD6 331 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 FAM126AQ9BYI3 521 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 MTG2Q9H4K7 406 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ATP13A1Q9HD20 1204 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 LUC7LQ9NQ29 371 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 TMEM248Q9NWD8 314 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ZNF212Q9UDV6 495 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SLC25A13Q9UJS0 675 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ERVW-1Q9UQF0 538 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 INVSQ9Y283 1065 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 TBC1D30Q9Y2I9 924 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PCDHGA2Q9Y5H1 932 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PCDHA13Q9Y5I0 950 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SPTBN4Q9H254 2564 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 TTC34A8MYJ7 566 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 EIF3CLB5ME19 914 aaKnown RBP7.07□□□□□ -1.28
BRCA1-215ENST00000478531 BNIP3LO60238 219 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 TNNT1P13805 278 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 GABRG2P18507 467 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 NDUFV2P19404 249 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 FECHP22830 423 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 MAPKAPK2P49137 400 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 GNA12Q03113 381 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 SULT2A1Q06520 285 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 SEMA3BQ13214 749 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 KRT81Q14533 505 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 LPAL2Q16609 132 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 ACCSLQ4AC99 568 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 IL31Q6EBC2 164 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 LINGO4Q6UY18 593 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 CEP68Q76N32 757 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 WDR5BQ86VZ2 330 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 NLRP14Q86W24 1093 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 TMEM139Q8IV31 216 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 RLN3Q8WXF3 142 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 MRGPRX3Q96LB0 322 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 PPP1R9BQ96SB3 815 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 EIF3CQ99613 913 aaKnown RBP7.07□□□□□ -1.28
BRCA1-215ENST00000478531 NCAPGQ9BPX3 1015 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 DESI2Q9BSY9 194 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 C2orf49Q9BVC5 232 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-215ENST00000478531 CATSPERBQ9H7T0 1116 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 VPS51Q9UID3 782 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 SLCO3A1Q9UIG8 710 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 INTUQ9ULD6 942 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 HYOU1Q9Y4L1 999 aa7.07□□□□□ -1.28
BRCA1-215ENST00000478531 EPN1Q9Y6I3 576 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-215ENST00000478531 PTPRZ1P23471 2315 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-215ENST00000478531 ILVBLA1L0T0 632 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 DCLK1O15075 740 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 FGF10O15520 208 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 RAMP2O60895 175 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 RPP40O75818 363 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 LCA5LO95447 670 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 SRPRAP08240 638 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 RARAP10276 462 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 VAV1P15498 845 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ACVRL1P37023 503 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 NNMTP40261 264 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ARL4AP40617 200 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 PLK1P53350 603 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 NAP1L1P55209 391 aaKnown RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 CDH6P55285 790 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 GSDMDP57764 484 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 KRT83P78385 493 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 ENPP2Q13822 863 aa7.06□□□□□ -1.28
BRCA1-215ENST00000478531 POLD3Q15054 466 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-215ENST00000478531 HADHQ16836 314 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms