RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 FTHL17Q9BXU8 183 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 PDZD7Q9H5P4 517 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 CYP3A43Q9HB55 503 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 FAM8A1Q9UBU6 413 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 CRYL1Q9Y2S2 319 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 TDRKHQ9Y2W6 561 aaKnown RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 RNF103-CHMP3A0A140T963 221 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 ZBTB42B2RXF5 422 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 JUNP05412 331 aaKnown RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 VAV1P15498 845 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 PSMC3P17980 439 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 XRCC1P18887 633 aaPredicted RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 CHRNA4P43681 627 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 SNX16P57768 344 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 PDAP1Q13442 181 aaKnown RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 SNAPC2Q13487 334 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 CNPY1Q3B7I2 92 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 SLC9A4Q6AI14 798 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 DRICH1Q6PGQ1 229 aaPredicted RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 OR6J1Q8NGC5 347 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 LPPQ93052 612 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 CDHR5Q9HBB8 845 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 KCNK4Q9NYG8 393 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 CDH22Q9UJ99 828 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 VANGL2Q9ULK5 521 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 POMPQ9Y244 141 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 LTBP3Q9NS15 1303 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 KIAA1217Q5T5P2 1943 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 C3orf70A6NLC5 250 aaPredicted RBP9.96□□□□□ -0.81
CMC1-209ENST00000477739 C9IYK1 514 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 FAM189A1O60320 539 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 TCEA3O75764 348 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 RECQL4O94761 1208 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 CLPTM1O96005 669 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 UGT1A6P19224 532 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 ATICP31939 592 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 IDH3AP50213 366 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 GALK1P51570 392 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 GJA9P57773 515 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 SLC6A3Q01959 620 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 AGKQ53H12 422 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 OR9I1Q8NGQ6 314 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 ESAMQ96AP7 390 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 UBE2OQ9C0C9 1292 aaKnown RBP9.96□□□□□ -0.81
CMC1-209ENST00000477739 USP29Q9HBJ7 922 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 UBA6A0AVT1 1052 aaPredicted RBP9.96□□□□□ -0.81
CMC1-209ENST00000477739 FAM72CH0Y354 149 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 ZBTB14O43829 449 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 BNIP3LO60238 219 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 COX4I1P13073 169 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 VCLP18206 1134 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 NFKB1P19838 968 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 TPD52P55327 224 aaPredicted RBP9.96□□□□□ -0.81
CMC1-209ENST00000477739 CCDC15Q0P6D6 951 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 PPP1R8Q12972 351 aaKnown RBP9.96□□□□□ -0.81
CMC1-209ENST00000477739 MPP3Q13368 585 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 GRIK4Q16099 956 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 FAM72AQ5TYM5 149 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 CLEC6AQ6EIG7 209 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 FAM72DQ6L9T8 149 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 ILDR2Q71H61 639 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 FAM72BQ86X60 149 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 BEST2Q8NFU1 509 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 DNAJB3Q8WWF6 145 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 CYGBQ8WWM9 190 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 CYP2S1Q96SQ9 504 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 CIB1Q99828 191 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 TRPC7Q9HCX4 862 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 EURLQ9NYK6 297 aa9.96□□□□□ -0.81
CMC1-209ENST00000477739 MKI67P46013 3256 aaKnown RBP9.96□□□□□ -0.82
CMC1-209ENST00000477739 C15orf38-AP3S2A0A0A6YYH1 394 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 IGKV6-21A0A0C4DH24 114 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.96□□□□□ -0.82
CMC1-209ENST00000477739 C2P06681 752 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 HNRNPCP07910 306 aaKnown RBP eCLIP9.96□□□□□ -0.82
CMC1-209ENST00000477739 GRIA4P48058 902 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 TKTL1P51854 596 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 THOP1P52888 689 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 ABCE1P61221 599 aaKnown RBP9.96□□□□□ -0.82
CMC1-209ENST00000477739 KCNJ11Q14654 390 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 NAPRTQ6XQN6 538 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 CHST15Q7LFX5 561 aaPredicted RBP9.96□□□□□ -0.82
CMC1-209ENST00000477739 ARPINQ7Z6K5 226 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 UBR7Q8N806 425 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 NIPA2Q8N8Q9 360 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 CMTM5Q96DZ9 223 aa9.96□□□□□ -0.82
CMC1-209ENST00000477739 GCOM2Q9BZD3 368 aaPredicted RBP9.96□□□□□ -0.82
CMC1-209ENST00000477739 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
CMC1-209ENST00000477739 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.96□□□□□ -0.82
CMC1-209ENST00000477739 ZBTB24O43167 697 aaPredicted RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 SUPT7LO94864 414 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 SERPINE1P05121 402 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 CKMT2P17540 419 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ETV4P43268 484 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ALDH1A3P47895 512 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 BEX3Q00994 111 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 SLC5A9Q2M3M2 681 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 ARL13AQ5H913 290 aaPredicted RBP9.95□□□□□ -0.82
CMC1-209ENST00000477739 MTX3Q5HYI7 312 aa9.95□□□□□ -0.82
CMC1-209ENST00000477739 WSCD1Q658N2 575 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms