RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 ZNF362Q5T0B9 420 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 TMEM198Q66K66 360 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 LYSMD3Q7Z3D4 306 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 NANOGNBQ7Z5D8 188 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CMC1Q7Z7K0 106 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 SLC43A3Q8NBI5 491 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CHPT1Q8WUD6 406 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 RTP4Q96DX8 246 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 SGF29Q96ES7 293 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 COG8Q96MW5 612 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 CPXM1Q96SM3 734 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 EIF2AQ9BY44 585 aaKnown RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 TMEM39BQ9GZU3 492 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 ILKAPQ9H0C8 392 aaPredicted RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 NOL11Q9H8H0 719 aaKnown RBP13.7□□□□□ -0.22
DFFB-209ENST00000477548 CCPG1Q9ULG6 757 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 SPO11Q9Y5K1 396 aa13.7□□□□□ -0.22
DFFB-209ENST00000477548 SOBPA7XYQ1 873 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 LSM1O15116 133 aaKnown RBP13.69□□□□□ -0.22
DFFB-209ENST00000477548 NDUFB5O43674 189 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 ENTPD3O75355 529 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
DFFB-209ENST00000477548 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
DFFB-209ENST00000477548 MPSTP25325 297 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 CDO1Q16878 200 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 SH3PXD2AQ5TCZ1 1133 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 SEL1L3Q68CR1 1132 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 DCLRE1AQ6PJP8 1040 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 MCPH1Q8NEM0 835 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 NIF3L1Q9GZT8 377 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 HAPLN2Q9GZV7 340 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 PCDHAC1Q9H158 963 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 ACSS2Q9NR19 701 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 FBXO28Q9NVF7 368 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 TUBA8Q9NY65 449 aaPredicted RBP13.69□□□□□ -0.22
DFFB-209ENST00000477548 GABBR1Q9UBS5 961 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 ZNF646O15015 1829 aaPredicted RBP13.69□□□□□ -0.22
DFFB-209ENST00000477548 KPNA7A9QM74 516 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 H0YCG3 227 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 NFIBO00712 420 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 PRPSAP2O60256 369 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 CLASP2O75122 1294 aaKnown RBP13.69□□□□□ -0.22
DFFB-209ENST00000477548 CKMT2P17540 419 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 CD247P20963 164 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 SFNP31947 248 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 DGKZQ13574 1117 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 AARS2Q5JTZ9 985 aaKnown RBP13.69□□□□□ -0.22
DFFB-209ENST00000477548 BSPRYQ5W0U4 402 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 XYLT1Q86Y38 959 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 ASB9Q96DX5 294 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 ATXN7L3BQ96GX2 97 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 PIH1D1Q9NWS0 290 aaKnown RBP13.69□□□□□ -0.22
DFFB-209ENST00000477548 AFG3L2Q9Y4W6 797 aa13.69□□□□□ -0.22
DFFB-209ENST00000477548 BCLAF3A2AJT9 711 aaKnown RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 TMEM114B3SHH9 223 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 SPTLC1O15269 473 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 HDAC3O15379 428 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 ERBB2P04626 1255 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 GARSP41250 739 aaKnown RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 HSD17B4P51659 736 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 NIPAL4Q0D2K0 466 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 STILQ15468 1287 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 SCYL2Q6P3W7 929 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 CACTIN-AS1Q8N1I8 211 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 ERLEC1Q96DZ1 483 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 ADPGKQ9BRR6 497 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 GPATCH2LQ9NWQ4 482 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 SEPT9Q9UHD8 586 aaPredicted RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 GNPTGQ9UJJ9 305 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 CFAP99D6REC4 459 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 NOL3O60936 208 aaKnown RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 LDHAP00338 332 aaKnown RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 CHRNGP07510 517 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 DPEP1P16444 411 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 BMXP51813 675 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 SESN2P58004 480 aaPredicted RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 KRT76Q01546 638 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 ITGADQ13349 1161 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 TRIM25Q14258 630 aaKnown RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 MOGQ16653 247 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 RAB6CQ53S08 254 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 FAM102AQ5T9C2 384 aaPredicted RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 TMEM26Q6ZUK4 368 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 PCDH20Q8N6Y1 951 aaKnown RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 EFHD1Q9BUP0 239 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 TARS2Q9BW92 718 aaKnown RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 RAB6CQ9H0N0 254 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.68□□□□□ -0.22
DFFB-209ENST00000477548 GPBP1L1Q9HC44 474 aaPredicted RBP13.68□□□□□ -0.22
DFFB-209ENST00000477548 SNX15Q9NRS6 342 aa13.68□□□□□ -0.22
DFFB-209ENST00000477548 TRIM13O60858 407 aa13.67□□□□□ -0.22
DFFB-209ENST00000477548 CNOT3O75175 753 aaKnown RBP13.67□□□□□ -0.22
DFFB-209ENST00000477548 TADA2AO75478 443 aa13.67□□□□□ -0.22
DFFB-209ENST00000477548 DGAT1O75907 488 aa13.67□□□□□ -0.22
DFFB-209ENST00000477548 TPPPO94811 219 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms