RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PPM1KQ8N3J5 372 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 GUF1Q8N442 669 aaKnown RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 FAM181AQ8N9Y4 354 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 LSM14AQ8ND56 463 aaKnown RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 DQX1Q8TE96 717 aaKnown RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 IRGQQ8WZA9 623 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 PTPRN2Q92932 1015 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 FAXDC2Q96IV6 333 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 FCRL2Q96LA5 508 aaPredicted RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 NT5C1BQ96P26 610 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 DEPDC7Q96QD5 511 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 SPAG5Q96R06 1193 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 FAM129BQ96TA1 746 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 IRX2Q9BZI1 471 aaPredicted RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 FAM204AQ9H8W3 233 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 ERVMER34-1Q9H9K5 563 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 FZD3Q9NPG1 666 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 DYRK4Q9NR20 520 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 EVA1BQ9NVM1 165 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 UCKL1Q9NWZ5 548 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 XPO7Q9UIA9 1087 aaKnown RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 TPX2Q9ULW0 747 aaKnown RBP6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 TLR6Q9Y2C9 796 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 ITIH6Q6UXX5 1313 aa6.89□□□□□ -1.31
RTFDC1-206ENST00000477485 CHD5Q8TDI0 1954 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 A0A1B0GVM2 712 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 PRAMEF26H0Y7S4 382 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 KPNA3O00505 521 aaPredicted RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 PLRG1O43660 514 aaKnown RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC28A2O43868 658 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 RNGTTO60942 597 aaKnown RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 FBXO21O94952 628 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 PCDH8O95206 1070 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 KRT5P13647 590 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 RBMS1P29558 406 aaKnown RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 RXRGP48443 463 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 UCNP55089 124 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 RHDQ02161 417 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 ENPEPQ07075 957 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 DPYDQ12882 1025 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF211Q13398 564 aaPredicted RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 PKP1Q13835 747 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 EDRF1Q3B7T1 1238 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 ZC3H12AQ5D1E8 599 aaKnown RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF542PQ5EBM4 170 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 RABGAP1LQ5R372 815 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 ATL3Q6DD88 541 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 CRTC1Q6UUV9 634 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 Q6ZVU0 165 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 PTAR1Q7Z6K3 402 aaPredicted RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 IQCHQ86VS3 1027 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 LSMEM2Q8N112 164 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 CCAR2Q8N163 923 aaKnown RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 ATP6V0D2Q8N8Y2 350 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 DCBLD1Q8N8Z6 715 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 KDM1BQ8NB78 822 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 OR4C6Q8NH72 309 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 MAPK15Q8TD08 544 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 TFAP2BQ92481 460 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 AZIN2Q96A70 460 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 CCDC34Q96HJ3 373 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 LMLNQ96KR4 655 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF578Q96N58 590 aaPredicted RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 RPRD1AQ96P16 312 aaPredicted RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 THSD1Q9NS62 852 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 DNAJC28Q9NX36 388 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 ARMCX3Q9UH62 379 aaPredicted RBP6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC12A6Q9UHW9 1150 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 VPS28Q9UK41 221 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 SARDHQ9UL12 918 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 KIAA1257Q9ULG3 409 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 DMTF1Q9Y222 760 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 MYO18BQ8IUG5 2567 aa6.88□□□□□ -1.31
RTFDC1-206ENST00000477485 CFAP46Q8IYW2 2715 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 COL6A6A6NMZ7 2263 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 A0A1W2PQU0 124 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CPED1A4D0V7 1026 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC16A3O15427 465 aaKnown RBP6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SLC7A4O43246 635 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SART1O43290 800 aaKnown RBP6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 LATO43561 262 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 OPA1O60313 960 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 NEBLO76041 1014 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 TRUB2O95900 331 aaKnown RBP6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 PAEPP09466 180 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 DGKAP23743 735 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CMA1P23946 247 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 AKT2P31751 481 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 NUDT1P36639 197 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 GGCXP38435 758 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 DUSP3P51452 185 aaPredicted RBP6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CLDN2P57739 230 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 KRT85P78386 507 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CENPCQ03188 943 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 SULT2A1Q06520 285 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 CETN1Q12798 172 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 OVGP1Q12889 678 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 ARID5BQ14865 1188 aa6.87□□□□□ -1.31
RTFDC1-206ENST00000477485 DLG2Q15700 870 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms