RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 OIT3Q8WWZ8 545 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 GPR78Q96P69 363 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 EIF3CQ99613 913 aaKnown RBP4.62□□□□□ -1.67
UBR3-209ENST00000477461 ELOVL1Q9BW60 279 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 TRIM2Q9C040 744 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 MYLK2Q9H1R3 596 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 AGO2Q9UKV8 859 aaKnown RBP4.62□□□□□ -1.67
UBR3-209ENST00000477461 ZMYND8Q9ULU4 1186 aaPredicted RBP4.62□□□□□ -1.67
UBR3-209ENST00000477461 PPIP5K1Q6PFW1 1433 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 CKAP5Q14008 2032 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 MYOM1P52179 1685 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 KIR2DS5A0A0G2JLQ3 304 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 KIR2DS3K7RE56 304 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 M0QZQ0 153 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 HNRNPDLO14979 420 aaKnown RBP4.61□□□□□ -1.67
UBR3-209ENST00000477461 TOM1O60784 492 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 MYL3P08590 195 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 IFIT2P09913 472 aaKnown RBP4.61□□□□□ -1.67
UBR3-209ENST00000477461 TGFB3P10600 412 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 AKR1A1P14550 325 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 SLC5A2P31639 672 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 GSTM5P46439 218 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 ZXDBP98169 803 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 DLGAP5Q15398 846 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 ARHGAP15Q53QZ3 475 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 RAP1GAP2Q684P5 730 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 HMBOX1Q6NT76 420 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 CCDC144NLQ6NUI1 221 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 HIBCHQ6NVY1 386 aaPredicted RBP4.61□□□□□ -1.67
UBR3-209ENST00000477461 SRLQ86TD4 932 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 CCDC28AQ8IWP9 274 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 CCDC150Q8NCX0 1101 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 SPATA3Q8NHX4 192 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 PARD3BQ8TEW8 1205 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 GRAMD1AQ96CP6 724 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 ZNF845Q96IR2 970 aaPredicted RBP4.61□□□□□ -1.67
UBR3-209ENST00000477461 WDR24Q96S15 920 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 TMEM204Q9BSN7 226 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 MAGEB5Q9BZ81 275 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 FZD3Q9NPG1 666 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 KNSTRNQ9Y448 316 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 ATP7BP35670 1465 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 KIF1AQ12756 1690 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 TOPAZ1Q8N9V7 1692 aa4.61□□□□□ -1.67
UBR3-209ENST00000477461 TNFRSF13BO14836 293 aaPredicted RBP4.6□□□□□ -1.67
UBR3-209ENST00000477461 MMP8P22894 467 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 SLC8A1P32418 973 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 MORC3Q14149 939 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 PIK3CD-AS1Q5SR53 167 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 C6orf10Q5SRN2 563 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 SYCP2LQ5T4T6 812 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 ACSM6Q6P461 480 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 KIAA0408Q6ZU52 694 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 DCP1BQ8IZD4 617 aaKnown RBP4.6□□□□□ -1.67
UBR3-209ENST00000477461 OR52L2PQ8NGH6 319 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 NEUROG1Q92886 237 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 RNF26Q9BY78 433 aaPredicted RBP4.6□□□□□ -1.67
UBR3-209ENST00000477461 RBM38Q9H0Z9 239 aaKnown RBP4.6□□□□□ -1.67
UBR3-209ENST00000477461 PCDHAC1Q9H158 963 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 PANK3Q9H999 370 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 NECTIN3Q9NQS3 549 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 TM7SF3Q9NS93 570 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 B3GNT3Q9Y2A9 372 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 INSL5Q9Y5Q6 135 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 EMSYQ7Z589 1322 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 KTN1Q86UP2 1357 aaKnown RBP4.6□□□□□ -1.67
UBR3-209ENST00000477461 ANKRD36BQ8N2N9 1353 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 MST1RQ04912 1400 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 IQSEC2Q5JU85 1478 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 C1orf167Q5SNV9 1468 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 USP32Q8NFA0 1604 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 AKAP12Q02952 1782 aa4.6□□□□□ -1.67
UBR3-209ENST00000477461 A0A1W2PP64 1363 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 DPPA5A6NC42 116 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 OR2W5A6NFC9 320 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 NCK2O43639 380 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 NDST3O95803 873 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 ACEP12821 1306 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 IDEP14735 1019 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 MATN1P21941 496 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 GABRB3P28472 473 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 CGNL1Q0VF96 1302 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 SLC35G1Q2M3R5 365 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 TTLL5Q6EMB2 1281 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 C16orf89Q6UX73 402 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 PIK3AP1Q6ZUJ8 805 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 TRAPPC11Q7Z392 1133 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 NPHP3Q7Z494 1330 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.59□□□□□ -1.67
UBR3-209ENST00000477461 FBXL14Q8N1E6 418 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 LMLNQ96KR4 655 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 SNX27Q96L92 541 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 NTPCRQ9BSD7 190 aaKnown RBP4.59□□□□□ -1.67
UBR3-209ENST00000477461 ABHD14AQ9BUJ0 271 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 HTATIP2Q9BUP3 242 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 CDCP1Q9H5V8 836 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 CERS4Q9HA82 394 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 FNIP2Q9P278 1114 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 ZNF112Q9UJU3 913 aa4.59□□□□□ -1.67
UBR3-209ENST00000477461 KIF20BQ96Q89 1820 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms