RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CHD5Q8TDI0 1954 aa30.31■■■□□ 2.44
HOXB3-208ENST00000476342 MUC22E2RYF6 1773 aaPredicted RBP30.31■■■□□ 2.44
HOXB3-208ENST00000476342 A0A0D9SEW6 157 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 KRT86O43790 486 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 ADAM23O75077 832 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 SRPRAP08240 638 aaKnown RBP30.3■■■□□ 2.44
HOXB3-208ENST00000476342 HOXB2P14652 356 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 IL12RB1P42701 662 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 ENPP2Q13822 863 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 PDK2Q15119 407 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 CRY1Q16526 586 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 PTPRNQ16849 979 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 KCTD6Q8NC69 237 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 MAGEH1Q9H213 219 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 KCNH6Q9H252 994 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 SLC25A13Q9UJS0 675 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 ERVW-1Q9UQF0 538 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 HYOU1Q9Y4L1 999 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 ERCC2P18074 760 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 WASP42768 502 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 DGKEP52429 567 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 ATP13A4Q4VNC1 1196 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 KDM1BQ8NB78 822 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 FAM71BQ8TC56 605 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 CSPG4P5Q96PW8 444 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 ATP13A1Q9HD20 1204 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 POLMQ9NP87 494 aaPredicted RBP30.3■■■□□ 2.44
HOXB3-208ENST00000476342 HCN4Q9Y3Q4 1203 aa30.3■■■□□ 2.44
HOXB3-208ENST00000476342 MACROD2A1Z1Q3 448 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 NNMTP40261 264 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 NUMBP49757 651 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 DPYSQ14117 519 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 STARD3Q14849 445 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 POLD3Q15054 466 aaPredicted RBP30.29■■■□□ 2.44
HOXB3-208ENST00000476342 ODF2Q5BJF6 829 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 CAMKK1Q8N5S9 505 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 OR7D4Q8NG98 312 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 SPON2Q9BUD6 331 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 CALN1Q9BXU9 219 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 GOLPH3Q9H4A6 298 aa30.29■■■□□ 2.44
HOXB3-208ENST00000476342 WASH3PC4AMC7 463 aa30.28■■■□□ 2.44
HOXB3-208ENST00000476342 PSTPIP1O43586 416 aa30.28■■■□□ 2.44
HOXB3-208ENST00000476342 CTSOP43234 321 aaPredicted RBP30.28■■■□□ 2.44
HOXB3-208ENST00000476342 YBEYP58557 167 aaPredicted RBP30.28■■■□□ 2.44
HOXB3-208ENST00000476342 CSTF1Q05048 431 aaKnown RBP30.28■■■□□ 2.44
HOXB3-208ENST00000476342 IL31Q6EBC2 164 aa30.28■■■□□ 2.44
HOXB3-208ENST00000476342 MAML2Q8IZL2 1156 aaPredicted RBP30.28■■■□□ 2.44
HOXB3-208ENST00000476342 UMODL1-AS1Q8N2C9 162 aa30.28■■■□□ 2.44
HOXB3-208ENST00000476342 TSC1Q92574 1164 aa30.28■■■□□ 2.44
HOXB3-208ENST00000476342 ZNF670Q9BS34 389 aa30.28■■■□□ 2.44
HOXB3-208ENST00000476342 KLHL11Q9NVR0 708 aa30.28■■■□□ 2.44
HOXB3-208ENST00000476342 POLR3BQ9NW08 1133 aaPredicted RBP30.28■■■□□ 2.44
HOXB3-208ENST00000476342 DDX56Q9NY93 547 aaKnown RBP30.28■■■□□ 2.44
HOXB3-208ENST00000476342 TRIM10Q9UDY6 481 aa30.28■■■□□ 2.44
HOXB3-208ENST00000476342 A0A0U1RQJ8 604 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 TNNT1P13805 278 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 ARSEP51690 589 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 DPYSL3Q14195 570 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 PARP15Q460N3 678 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 TMEM92Q6UXU6 159 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 RNF10Q8N5U6 811 aaKnown RBP30.27■■■□□ 2.44
HOXB3-208ENST00000476342 TSTD1Q8NFU3 115 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 KIAA1524Q8TCG1 905 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 ATRIPQ8WXE1 791 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 ARHGEF2Q92974 986 aaKnown RBP30.27■■■□□ 2.44
HOXB3-208ENST00000476342 RPL10LQ96L21 214 aaKnown RBP30.27■■■□□ 2.44
HOXB3-208ENST00000476342 MRGPRX3Q96LB0 322 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 PSMB7Q99436 277 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 TMEM245Q9H330 911 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 VPS51Q9UID3 782 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 HPCAL4Q9UM19 191 aa30.27■■■□□ 2.44
HOXB3-208ENST00000476342 K7ESF4 209 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 CBX4O00257 560 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 SYNCRIPO60506 623 aaKnown RBP30.26■■■□□ 2.43
HOXB3-208ENST00000476342 EPHX1P07099 455 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 NDST2P52849 883 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 CCDC173Q0VFZ6 552 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 ZNF354CQ86Y25 554 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 SYCE1Q8N0S2 351 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 LZTR1Q8N653 840 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 MYO19Q96H55 970 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 HHIPQ96QV1 700 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 ACE2Q9BYF1 805 aaPredicted RBP30.26■■■□□ 2.43
HOXB3-208ENST00000476342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP30.26■■■□□ 2.43
HOXB3-208ENST00000476342 CKAP5Q14008 2032 aa30.26■■■□□ 2.43
HOXB3-208ENST00000476342 WDFY4Q6ZS81 3184 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 LRRD1A4D1F6 860 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 ALDH1A2O94788 518 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 APBB3O95704 486 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 CD48P09326 243 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 KDELR1P24390 212 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 PRKCHP24723 683 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 VASPP50552 380 aaPredicted RBP30.25■■■□□ 2.43
HOXB3-208ENST00000476342 ZNF528Q3MIS6 628 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 RETSATQ6NUM9 610 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 TSSK4Q6SA08 328 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 TMCO3Q6UWJ1 677 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 FAM126AQ9BYI3 521 aaPredicted RBP30.25■■■□□ 2.43
HOXB3-208ENST00000476342 SUN2Q9UH99 717 aa30.25■■■□□ 2.43
HOXB3-208ENST00000476342 RAD54BQ9Y620 910 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms