RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 VPS52Q8N1B4 723 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 NME8Q8N427 588 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 EMC1Q8N766 993 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 KCTD6Q8NC69 237 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 PIWIL2Q8TC59 973 aaKnown RBP7.04□□□□□ -1.28
UBR4-212ENST00000475973 JADE3Q92613 823 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 PPP2R3CQ969Q6 453 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 NT5C3BQ969T7 300 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 ANKRD36BP1Q96IX9 119 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 CNDP1Q96KN2 507 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 QKIQ96PU8 341 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBR4-212ENST00000475973 BTBD9Q96Q07 612 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 GPR20Q99678 358 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 ECSITQ9BQ95 431 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 GCOM2Q9BZD3 368 aaPredicted RBP7.04□□□□□ -1.28
UBR4-212ENST00000475973 TUT1Q9H6E5 874 aaKnown RBP7.04□□□□□ -1.28
UBR4-212ENST00000475973 ZWILCHQ9H900 591 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 IFT122Q9HBG6 1241 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 PAPOLBQ9NRJ5 636 aaKnown RBP7.04□□□□□ -1.28
UBR4-212ENST00000475973 HESX1Q9UBX0 185 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 ZC3H7BQ9UGR2 993 aaKnown RBP7.04□□□□□ -1.28
UBR4-212ENST00000475973 SOX13Q9UN79 622 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 C2CD2Q9Y426 696 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 WASF2Q9Y6W5 498 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 COL6A3P12111 3177 aa7.04□□□□□ -1.28
UBR4-212ENST00000475973 WDR91A4D1P6 747 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 PRR5-ARHGAP8B1AHC4 643 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SPECC1L-ADORA2AF8WAN1 911 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 H3BNX3 289 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 CYB561D2O14569 222 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SLC22A2O15244 555 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 DENRO43583 198 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 UGT1A9O60656 530 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 PRMT3O60678 531 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 GLRA3O75311 464 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 AVILO75366 819 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 PIAS1O75925 651 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SNUPNO95149 360 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 TNNC2P02585 160 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 AMHP03971 560 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 RPLP2P05387 115 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 ZFXP17010 805 aaPredicted RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 IBSPP21815 317 aaPredicted RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 GLDCP23378 1020 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 GRK2P25098 689 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 CALRP27797 417 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 ADSLP30566 484 aaPredicted RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 GJC1P36383 396 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SSR1P43307 286 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 PSMD8P48556 350 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 GLUD2P49448 558 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 CACNA2D1P54289 1103 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 AQP5P55064 265 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 MTTPP55157 894 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 CDH6P55285 790 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 ARHGAP8P85298 464 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SP4Q02446 784 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 MMRN1Q13201 1228 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 TRPC3Q13507 836 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 CCNIQ14094 377 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 RCN2Q14257 317 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 AAK1Q2M2I8 961 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SMTNL2Q2TAL5 461 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SLC10A6Q3KNW5 377 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 PABPC1LQ4VXU2 614 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 RAB6CQ53S08 254 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 ZNF667Q5HYK9 610 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 ZNF618Q5T7W0 954 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 OGFRL1Q5TC84 451 aaPredicted RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 SH3PXD2AQ5TCZ1 1133 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 ATF7IP2Q5U623 682 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 IRAK1BP1Q5VVH5 260 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 TAF2Q6P1X5 1199 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 TRMT10BQ6PF06 316 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 FAM183BPQ6ZVS7 135 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SLC26A9Q7LBE3 791 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 RSPH3Q86UC2 560 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SERINC5Q86VE9 423 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 RFX6Q8HWS3 928 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 CRLF3Q8IUI8 442 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 NUDCD3Q8IVD9 361 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 CDKL3Q8IVW4 592 aaPredicted RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 MAP7D3Q8IWC1 876 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 ZBTB8OSQ8IWT0 167 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 TMEM151AQ8N4L1 468 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 CCDC33Q8N5R6 958 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 PPFIBP2Q8ND30 876 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SEPT8Q92599 483 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 RNF166Q96A37 237 aaPredicted RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 PIWIL1Q96J94 861 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 TSC22D3Q99576 134 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 C16orf70Q9BSU1 422 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 NAT9Q9BTE0 207 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 SNRNP25Q9BV90 132 aaKnown RBP7.03□□□□□ -1.28
UBR4-212ENST00000475973 KLC2Q9H0B6 622 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 RAB6CQ9H0N0 254 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 NRDE2Q9H7Z3 1164 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 UGT1A7Q9HAW7 530 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 UGT1A10Q9HAW8 530 aa7.03□□□□□ -1.28
UBR4-212ENST00000475973 UGT1A8Q9HAW9 530 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms