RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SLC26A9Q7LBE3 791 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 TMPRSS7Q7RTY8 843 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 BNIPLQ7Z465 357 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 PROSER1Q86XN7 944 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 GATAD2AQ86YP4 633 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF557Q8N988 423 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF397Q8NF99 534 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-207ENST00000475549 OR2T34Q8NGX1 318 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 OR14C36Q8NHC7 312 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 SAP25Q8TEE9 199 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ZCCHC14Q8WYQ9 949 aaKnown RBP7.23□□□□□ -1.25
HDAC3-207ENST00000475549 PHF12Q96QT6 1004 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 PSMB7Q99436 277 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 NPY6RQ99463 290 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 TRIM62Q9BVG3 475 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 RAB6CQ9H0N0 254 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 NDST4Q9H3R1 872 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 CAAP1Q9H8G2 361 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 FAM204AQ9H8W3 233 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 SAMSN1Q9NSI8 373 aaKnown RBP7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ARHGEF38Q9NXL2 777 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF212Q9UDV6 495 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 VANGL2Q9ULK5 521 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 FZD4Q9ULV1 537 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 NCKAP1Q9Y2A7 1128 aa7.23□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 A0A0D9SEW6 157 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 A0A1B0GVM2 712 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 TYW5A2RUC4 315 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 FAM149AA5PLN7 773 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 TCAF2A6NFQ2 919 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 GOLGA8CPA6NN73 597 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 DRGXA6NNA5 263 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 CBX4O00257 560 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 MCF2LO15068 1137 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 SMAD6O43541 496 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 TNFSF14O43557 240 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 SNAP91O60641 907 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 RNASEH1O60930 286 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF821O75541 412 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 DAB1O75553 588 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 MOCS3O95396 460 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 IL1BP01584 269 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 CDH5P33151 784 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 NOS2P35228 1153 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 RDXP35241 583 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 KRT9P35527 623 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 GABRB2P47870 512 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 CLDN6P56747 220 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 TAS2R38P59533 333 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 RNASE9P60153 205 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 CNTN1Q12860 1018 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 ZNF177Q13360 481 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 SLC12A1Q13621 1099 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 DRAP1Q14919 205 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 SUZ12Q15022 739 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 TEAD4Q15561 434 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 DLG2Q15700 870 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 MAN2A1Q16706 1144 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 POM121L1PQ3SYA9 428 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 KLHDC7AQ5VTJ3 777 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 AGBL4Q5VU57 503 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 SPATS2Q86XZ4 545 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 XYLT1Q86Y38 959 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 ATP6V0D2Q8N8Y2 350 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 MDM1Q8TC05 714 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 RNF34Q969K3 372 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 VOPP1Q96AW1 172 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 FAM81BQ96LP2 452 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 RPRD1AQ96P16 312 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 OMDQ99983 421 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 TUBGCP2Q9BSJ2 902 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 MAGEB5Q9BZ81 275 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 TKTL2Q9H0I9 626 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 SIK2Q9H0K1 926 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 CLSTN2Q9H4D0 955 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 MPP6Q9NZW5 540 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 SLC12A6Q9UHW9 1150 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 TMEM59LQ9UK28 342 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 APOBEC2Q9Y235 224 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 CA5BQ9Y2D0 317 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 CEP83Q9Y592 693 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 FHOD1Q9Y613 1164 aa7.22□□□□□ -1.25
HDAC3-207ENST00000475549 SMG1Q96Q15 3661 aaKnown RBP7.22□□□□□ -1.25
HDAC3-207ENST00000475549 ADAMTS9Q9P2N4 1935 aa7.21□□□□□ -1.25
HDAC3-207ENST00000475549 NUMA1Q14980 2115 aa7.21□□□□□ -1.25
HDAC3-207ENST00000475549 KNL1Q8NG31 2342 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 IGLV3-10A0A075B6K4 115 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3DA0A087WVF3 549 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3IA0A087WXS9 549 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3EA0A087X179 549 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3KA0A087X1G2 549 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3FA6NER0 549 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TRABD2BA6NFA1 517 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 LRRC72A6NJI9 287 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3LB9A6J9 549 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TLR4O00206 839 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 PLRG1O43660 514 aaKnown RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 CLDN11O75508 207 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms