RNA–Protein interactions for RNA: ENST00000474689.3

RN7SL40P-201, Transcript of RNA, 7SL, cytoplasmic 40, pseudogene, humanhuman

BASIC

Gene RN7SL40P, Length 342 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL40P-201ENST00000474689 IRAK1P51617 712 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 ELAVL3Q14576 367 aaKnown RBP11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 STAT4Q14765 748 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 CNGA2Q16280 664 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 EDRF1Q3B7T1 1238 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 ZNF542PQ5EBM4 170 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 AGBL4Q5VU57 503 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 CDCP2Q5VXM1 449 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 ATL3Q6DD88 541 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 KRBA2Q6ZNG9 492 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 CACTIN-AS1Q8N1I8 211 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 OXR1Q8N573 874 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 ZNF557Q8N988 423 aaPredicted RBP11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 FAM149B1Q96BN6 582 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 SERPINB11Q96P15 392 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 NOX5Q96PH1 765 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 IRX2Q9BZI1 471 aaPredicted RBP11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 U3KQA8 63 aa11.17□□□□□ -0.62
RN7SL40P-201ENST00000474689 A0A1W2PNU3 283 aaPredicted RBP11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 PMS2P1A4D2B8 440 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 TRIM49BA6NDI0 452 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 ERVH48-1M5A8F1 160 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 CASC3O15234 703 aaKnown RBP11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 BNIP3LO60238 219 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 OPA1O60313 960 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 STX10O60499 249 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 USP12O75317 370 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 PAEPP09466 180 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 THEGLP0DJG4 465 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 GGCXP38435 758 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 PRCPP42785 496 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 CLDN2P57739 230 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 GABREP78334 506 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 CENPCQ03188 943 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 TAF5Q15542 800 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 ACCSLQ4AC99 568 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 ANKRD40Q6AI12 368 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 CXorf57Q6NSI4 855 aaKnown RBP11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 DENND1BQ6P3S1 775 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 Q6ZVU0 165 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 IQCHQ86VS3 1027 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 CCDC117Q8IWD4 279 aaPredicted RBP11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 CCAR2Q8N163 923 aaKnown RBP11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 ZNF248Q8NDW4 579 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 OR13H1Q8NG92 308 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 OR4C6Q8NH72 309 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 SLC35C1Q96A29 364 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 CCDC47Q96A33 483 aaKnown RBP11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 ALG14Q96F25 216 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 KLHDC7BQ96G42 594 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 SPAG5Q96R06 1193 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 DDX50Q9BQ39 737 aaKnown RBP11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 TJP2Q9UDY2 1190 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 PPM1HQ9ULR3 514 aa11.16□□□□□ -0.62
RN7SL40P-201ENST00000474689 FAM237AA0A1B0GTK4 181 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 A0A1W2PQU0 124 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 PRAMEF26H0Y7S4 382 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 KLK10O43240 276 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 RNGTTO60942 597 aaKnown RBP11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 CSO75390 466 aaKnown RBP11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 PIAS2O75928 621 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 NEBLO76041 1014 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 CTSLP07711 333 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 PCBP4P57723 403 aaKnown RBP11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 YWHAEP62258 255 aaKnown RBP11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 E2F1Q01094 437 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 KCNMA1Q12791 1236 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 RRAGAQ7L523 313 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 TRIM69Q86WT6 500 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 ARHGEF19Q8IW93 802 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 SLC22A18ASQ8N1D0 253 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 FAM181AQ8N9Y4 354 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 TMEM145Q8NBT3 493 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 OR8D1Q8WZ84 308 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 TTC9Q92623 222 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 ERCC4Q92889 916 aaPredicted RBP11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 HSFY1Q96LI6 401 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 SPATA32Q96LK8 384 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 PRMT1Q99873 361 aaKnown RBP11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 ASCL3Q9NQ33 180 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 KIAA1257Q9ULG3 409 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 DMTF1Q9Y222 760 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 ZDHHC9Q9Y397 364 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 KIF26BQ2KJY2 2108 aa11.15□□□□□ -0.62
RN7SL40P-201ENST00000474689 COL27A1Q8IZC6 1860 aaPredicted RBP11.15□□□□□ -0.63
RN7SL40P-201ENST00000474689 SPTA1P02549 2419 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 SYNJ2BP-COX16A0A087WUM0 186 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 K7ERQ8 282 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 SLC7A4O43246 635 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 FBXO21O94952 628 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 TRUB2O95900 331 aaKnown RBP11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 MT-CO1P00395 513 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 IGLV3-25P01717 112 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 APOEP02649 317 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 CKMT1AP12532 417 aa11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 TBXAS1P24557 533 aaPredicted RBP11.14□□□□□ -0.63
RN7SL40P-201ENST00000474689 NNMTP40261 264 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms