RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 BRSK2Q8IWQ3 736 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 SGF29Q96ES7 293 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 CNPY3Q9BT09 278 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 ILKAPQ9H0C8 392 aaPredicted RBP18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 RAVER2Q9HCJ3 691 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 TUBA8Q9NY65 449 aaPredicted RBP18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 ADA2Q9NZK5 511 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 TMED5Q9Y3A6 229 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 A0A1W2PPW3 197 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 SOBPA7XYQ1 873 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 MCF2P10911 925 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 SP4Q02446 784 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 EMC2Q15006 297 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 HERC3Q15034 1050 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 ZNF699Q32M78 642 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 SLCO4A1Q96BD0 722 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 GATA5Q9BWX5 397 aaPredicted RBP18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 KIAA1522Q9P206 1035 aaPredicted RBP18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 IPO11Q9UI26 975 aaKnown RBP18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 TRIM17Q9Y577 477 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 SCN4AP35499 1836 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 PTPRFP10586 1907 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 TCAF2A6NFQ2 919 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 GIPC1O14908 333 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 MED7O43513 233 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 TRIM13O60858 407 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 GPD1P21695 349 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 CCR10P46092 362 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 RHDQ02161 417 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 SEMA5AQ13591 1074 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 TRIM25Q14258 630 aaKnown RBP18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 FGD3Q5JSP0 725 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 C16orf87Q6PH81 154 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 C4orf22Q6V702 233 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 CCDC60Q8IWA6 550 aaPredicted RBP18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 DEPTORQ8TB45 409 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 CHPT1Q8WUD6 406 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 RXFP2Q8WXD0 754 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 ATXN7L3BQ96GX2 97 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 CXorf21Q9HAI6 301 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 TXNDC16Q9P2K2 825 aa18.98■□□□□ 0.63
ECHDC1-214ENST00000474289 PIK3R2O00459 728 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 GNAO1P09471 354 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 ERVK-10P10266 1014 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 PDGFRAP16234 1089 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 CKMT2P17540 419 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 SESN2P58004 480 aaPredicted RBP18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 PDK2Q15119 407 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 HMBOX1Q6NT76 420 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 HERC6Q8IVU3 1022 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 CDKL3Q8IVW4 592 aaPredicted RBP18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 ZNF786Q8N393 782 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 DCLK2Q8N568 766 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 ADAMTS16Q8TE57 1224 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 ARNTL2Q8WYA1 636 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 TFAP2CQ92754 450 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 ITPKCQ96DU7 683 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 PIWIL1Q96J94 861 aaKnown RBP18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 RMDN3Q96TC7 470 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 PDCD2LQ9BRP1 358 aa18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 NOL11Q9H8H0 719 aaKnown RBP18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 NXF1Q9UBU9 619 aaKnown RBP18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 FAM32AQ9Y421 112 aaKnown RBP18.97■□□□□ 0.63
ECHDC1-214ENST00000474289 C2CD4BA6NLJ0 364 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 CDH3P22223 829 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 AP3M2P53677 418 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 GHRHRQ02643 423 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 CA9Q16790 459 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 ZNF362Q5T0B9 420 aaPredicted RBP18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 NXNQ6DKJ4 435 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 SCYL2Q6P3W7 929 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 XYLT2Q9H1B5 865 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 VPS33BQ9H267 617 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 SPATA7Q9P0W8 599 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 SUCOQ9UBS9 1254 aaKnown RBP18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 DOCK5Q9H7D0 1870 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 KPNA7A9QM74 516 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 GRID2O43424 1007 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 GRAP2O75791 330 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 BAIAP3O94812 1187 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 JUNP05412 331 aaKnown RBP18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 F7P08709 466 aaPredicted RBP18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 MGAT1P26572 445 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 ADSLP30566 484 aaPredicted RBP18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 GP5P40197 560 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 MAGEA12P43365 314 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 RPL14P50914 215 aaKnown RBP18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 IRF9Q00978 393 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 GBE1Q04446 702 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 NAB1Q13506 487 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 AARS2Q5JTZ9 985 aaKnown RBP18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 ZBTB49Q6ZSB9 765 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 CNTD1Q8N815 330 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 MPHOSPH6Q99547 160 aaKnown RBP18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 DOK1Q99704 481 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 RAP2CQ9Y3L5 183 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 TANC1Q9C0D5 1861 aa18.96■□□□□ 0.63
ECHDC1-214ENST00000474289 SOCS2O14508 198 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 GSTT2P0CG29 244 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 GSTT2BP0CG30 244 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms