RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TMEM110-MUSTN1A8MSY1 372 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 CBX4O00257 560 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 RAMP2O60895 175 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 RHOBTB1O94844 696 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 GABRG2P18507 467 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 HOXC13P31276 330 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 ARL4AP40617 200 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 CTSOP43234 321 aaPredicted RBP14.1□□□□□ -0.15
USF1-205ENST00000473969 GNA12Q03113 381 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 SFSWAPQ12872 951 aaKnown RBP14.1□□□□□ -0.15
USF1-205ENST00000473969 SRSF5Q13243 272 aaKnown RBP14.1□□□□□ -0.15
USF1-205ENST00000473969 ELF2Q15723 593 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 PPP6R3Q5H9R7 873 aaPredicted RBP14.1□□□□□ -0.15
USF1-205ENST00000473969 ZFYVE27Q5T4F4 411 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 MANEALQ5VSG8 457 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 RETSATQ6NUM9 610 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 TMPRSS6Q8IU80 811 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 ZNF366Q8N895 744 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 DCAF4L2Q8NA75 395 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 ATP11CQ8NB49 1132 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 OR2T3Q8NH03 318 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 SLC35G2Q8TBE7 412 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 HSPH1Q92598 858 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 SIPA1Q96FS4 1042 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 MAGEB5Q9BZ81 275 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 MAGEH1Q9H213 219 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 ATP13A1Q9HD20 1204 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 GMEB2Q9UKD1 530 aa14.1□□□□□ -0.15
USF1-205ENST00000473969 SMG5Q9UPR3 1016 aaKnown RBP14.1□□□□□ -0.15
USF1-205ENST00000473969 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
USF1-205ENST00000473969 A0A0D9SEW6 157 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 EDDM13A0A1B0GTR0 161 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 TARSL2A2RTX5 802 aaKnown RBP14.09□□□□□ -0.15
USF1-205ENST00000473969 H3BRJ5 948 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 PROSCO94903 275 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 DNTTP04053 509 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 NDUFV2P19404 249 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 ARHGAP25P42331 645 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 NOP2P46087 812 aaKnown RBP14.09□□□□□ -0.15
USF1-205ENST00000473969 SLC20A2Q08357 652 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 CAMK2GQ13555 558 aaPredicted RBP14.09□□□□□ -0.15
USF1-205ENST00000473969 KRT81Q14533 505 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 MESDQ14696 234 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 POLD3Q15054 466 aaPredicted RBP14.09□□□□□ -0.15
USF1-205ENST00000473969 HNRNPA1L2Q32P51 320 aaKnown RBP14.09□□□□□ -0.15
USF1-205ENST00000473969 TXLNBQ8N3L3 684 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 ARFGAP1Q8N6T3 406 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 RTL3Q8N8U3 475 aaKnown RBP14.09□□□□□ -0.15
USF1-205ENST00000473969 OR7D4Q8NG98 312 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 OR52K2Q8NGK3 314 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 RFFLQ8WZ73 363 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 ALG14Q96F25 216 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 MRGPRX3Q96LB0 322 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 MRGPRX1Q96LB2 322 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 CCDC114Q96M63 670 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 BAG1Q99933 345 aaPredicted RBP14.09□□□□□ -0.15
USF1-205ENST00000473969 PRSS16Q9NQE7 514 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 NCDNQ9UBB6 729 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 SLCO3A1Q9UIG8 710 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 INVSQ9Y283 1065 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 OR51B4Q9Y5P0 310 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 CACNA1HO95180 2353 aa14.09□□□□□ -0.15
USF1-205ENST00000473969 TTC34A8MYJ7 566 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 GFRA3O60609 400 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 NDUFS2O75306 463 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 RECQLP46063 649 aaPredicted RBP14.08□□□□□ -0.16
USF1-205ENST00000473969 STK19P49842 368 aaPredicted RBP14.08□□□□□ -0.16
USF1-205ENST00000473969 VASPP50552 380 aaPredicted RBP14.08□□□□□ -0.16
USF1-205ENST00000473969 GEMIN4P57678 1058 aaKnown RBP14.08□□□□□ -0.16
USF1-205ENST00000473969 GSDMDP57764 484 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 YBEYP58557 167 aaPredicted RBP14.08□□□□□ -0.16
USF1-205ENST00000473969 DLG2Q15700 870 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 LPAL2Q16609 132 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 SMTNL2Q2TAL5 461 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 ODF2Q5BJF6 829 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 KCNT1Q5JUK3 1230 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 LAIR1Q6GTX8 287 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 SLC36A4Q6YBV0 504 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 DSG4Q86SJ6 1040 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 NLRP14Q86W24 1093 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 TEKT4Q8WW24 435 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 RLN3Q8WXF3 142 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 PEBP4Q96S96 227 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 KCTD15Q96SI1 283 aaPredicted RBP14.08□□□□□ -0.16
USF1-205ENST00000473969 OSGEPQ9NPF4 335 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.08□□□□□ -0.16
USF1-205ENST00000473969 VPS51Q9UID3 782 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 PCDHA13Q9Y5I0 950 aa14.08□□□□□ -0.16
USF1-205ENST00000473969 EPN1Q9Y6I3 576 aaPredicted RBP14.08□□□□□ -0.16
USF1-205ENST00000473969 PRR23AA6NEV1 266 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 SOWAHDA6NJG2 315 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 WASH4PA8MWX3 477 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 BNIP3LO60238 219 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 SNAP91O60641 907 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 SIN3BO75182 1162 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 NDUFA10O95299 355 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 LCA5LO95447 670 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 KRT7P08729 469 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms