RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 STARD3Q14849 445 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 C11orf63Q6NUN7 778 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 TMEM92Q6UXU6 159 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 CPNE8Q86YQ8 564 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 TSTD1Q8NFU3 115 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 FAM71BQ8TC56 605 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 PCDH18Q9HCL0 1135 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 POLR3BQ9NW08 1133 aaPredicted RBP21.31■■□□□ 1
TOP3A-204ENST00000472959 CWC15Q9P013 229 aaKnown RBP21.31■■□□□ 1
TOP3A-204ENST00000472959 RCOR3Q9P2K3 495 aaPredicted RBP21.31■■□□□ 1
TOP3A-204ENST00000472959 DNAI1Q9UI46 699 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 ADGRG1Q9Y653 693 aa21.31■■□□□ 1
TOP3A-204ENST00000472959 CCDC163A0A0D9SF12 145 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 CXorf51AA0A1B0GTR3 108 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 WASH3PC4AMC7 463 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 ZBTB24O43167 697 aaPredicted RBP21.3■■□□□ 1
TOP3A-204ENST00000472959 SPOPO43791 374 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 SYNCRIPO60506 623 aaKnown RBP21.3■■□□□ 1
TOP3A-204ENST00000472959 ALDH1A2O94788 518 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 COMTP21964 271 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 CTSOP43234 321 aaPredicted RBP21.3■■□□□ 1
TOP3A-204ENST00000472959 CDH6P55285 790 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 YBEYP58557 167 aaPredicted RBP21.3■■□□□ 1
TOP3A-204ENST00000472959 TCF15Q12870 199 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 PDK2Q15119 407 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 IFI16Q16666 785 aaKnown RBP21.3■■□□□ 1
TOP3A-204ENST00000472959 TSSK4Q6SA08 328 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 MAP7D3Q8IWC1 876 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 UMODL1-AS1Q8N2C9 162 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 KCTD6Q8NC69 237 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 TPCN2Q8NHX9 752 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 NELL1Q92832 810 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 MRGPRX3Q96LB0 322 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 PSMB7Q99436 277 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 SPON2Q9BUD6 331 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 NDFIP2Q9NV92 336 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 EBF1Q9UH73 591 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 SUN2Q9UH99 717 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 SALL4Q9UJQ4 1053 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 SLC25A13Q9UJS0 675 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 ARIH1Q9Y4X5 557 aaPredicted RBP21.3■■□□□ 1
TOP3A-204ENST00000472959 ALG6Q9Y672 507 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 DUSP10Q9Y6W6 482 aa21.3■■□□□ 1
TOP3A-204ENST00000472959 CACNA1IQ9P0X4 2223 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 A0A1W2PQF6 199 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 PRKCHP24723 683 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 GJC1P36383 396 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 ARSEP51690 589 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 NAP1L1P55209 391 aaKnown RBP21.29■■□□□ 1
TOP3A-204ENST00000472959 CCZ1BP86790 482 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 CCZ1P86791 482 aaPredicted RBP21.29■■□□□ 1
TOP3A-204ENST00000472959 DPYSQ14117 519 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 POLD3Q15054 466 aaPredicted RBP21.29■■□□□ 1
TOP3A-204ENST00000472959 PARP15Q460N3 678 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 RHOT1Q8IXI2 618 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 OR7D4Q8NG98 312 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 TSC1Q92574 1164 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 ARHGEF2Q92974 986 aaKnown RBP21.29■■□□□ 1
TOP3A-204ENST00000472959 PDLIM2Q96JY6 352 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 CSPG4P5Q96PW8 444 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 HHIPQ96QV1 700 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 ACE2Q9BYF1 805 aaPredicted RBP21.29■■□□□ 1
TOP3A-204ENST00000472959 ATP13A1Q9HD20 1204 aa21.29■■□□□ 1
TOP3A-204ENST00000472959 H0Y858 1186 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 BUB1O43683 1085 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 EPHX1P07099 455 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 ERCC2P18074 760 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 NDST2P52849 883 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 SLC20A2Q08357 652 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 ATP13A4Q4VNC1 1196 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 ZFYVE27Q5T4F4 411 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 IL31Q6EBC2 164 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 RETSATQ6NUM9 610 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 DAAM2Q86T65 1068 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 LZTR1Q8N653 840 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 MYO19Q96H55 970 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 TSGA10Q9BZW7 698 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 CD248Q9HCU0 757 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 ZSCAN32Q9NX65 697 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 VPS51Q9UID3 782 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 HPCAL4Q9UM19 191 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 HS3ST2Q9Y278 367 aa21.28■■□□□ 1
TOP3A-204ENST00000472959 TCRBV21S2A2A0A5A6 115 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 CBX4O00257 560 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 SNAP91O60641 907 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 CCDC175P0C221 793 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 COL9A1P20849 921 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 IL4RP24394 825 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 CAMK2GQ13555 558 aaPredicted RBP21.27■■□□□ 1
TOP3A-204ENST00000472959 HNRNPA1L2Q32P51 320 aaKnown RBP21.27■■□□□ 1
TOP3A-204ENST00000472959 KIAA1211LQ6NV74 962 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 LONP2Q86WA8 852 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 RASSF3Q86WH2 238 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 RPL10LQ96L21 214 aaKnown RBP21.27■■□□□ 1
TOP3A-204ENST00000472959 ZNF670Q9BS34 389 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 CALN1Q9BXU9 219 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 NOL6Q9H6R4 1146 aaKnown RBP21.27■■□□□ 1
TOP3A-204ENST00000472959 FBRSQ9HAH7 460 aa21.27■■□□□ 1
TOP3A-204ENST00000472959 DDX56Q9NY93 547 aaKnown RBP21.27■■□□□ 1
TOP3A-204ENST00000472959 SLCO3A1Q9UIG8 710 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms