RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 FSCN3Q9NQT6 498 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 KRT82Q9NSB4 513 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 TMEM74BQ9NUR3 256 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 UVRAGQ9P2Y5 699 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 TJP2Q9UDY2 1190 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 MBD1Q9UIS9 605 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ANAPC7Q9UJX3 599 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 DSEQ9UL01 958 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 CDH9Q9ULB4 789 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 KIAA1257Q9ULG3 409 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 STRIP2Q9ULQ0 834 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 RAXQ9Y2V3 346 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 SCINQ9Y6U3 715 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 TNRC6BQ9UPQ9 1833 aaKnown RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 HELZP42694 1942 aaKnown RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 PCDH15Q96QU1 1955 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 E5RJQ4 531 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 CLDN5O00501 218 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 GABRDO14764 452 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 MAN1A2O60476 641 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ATP2C2O75185 946 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 GJB6O95452 261 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ERBB2P04626 1255 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 FAM163BP0C2L3 166 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 FAM200BP0CF97 657 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 PTPN1P18031 435 aaKnown RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 CDC25CP30307 473 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 CDR1P51861 262 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 HADHBP55084 474 aaKnown RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 AMPD2Q01433 879 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 TSPY1Q01534 308 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 MESDQ14696 234 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ZNF423Q2M1K9 1284 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ANO7Q6IWH7 933 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 SLC23A3Q6PIS1 610 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 CCNI2Q6ZMN8 369 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ARMCX6Q7L4S7 300 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 PEX26Q7Z412 305 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ITIH5Q86UX2 942 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 SYCE1Q8N0S2 351 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 FUKQ8N0W3 1084 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 CRYBG2Q8N1P7 616 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 OR10T2Q8NGX3 314 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 USP33Q8TEY7 942 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 SHROOM3Q8TF72 1996 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 HNRNPLLQ8WVV9 542 aaKnown RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 MYLPFQ96A32 169 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 VCPIP1Q96JH7 1222 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 BTBD6Q96KE9 485 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 MCEEQ96PE7 176 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 PSMB7Q99436 277 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ATXN2Q99700 1313 aaKnown RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 NUSAP1Q9BXS6 441 aaKnown RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 OXCT2Q9BYC2 517 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 TRIM7Q9C029 511 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ECT2Q9H8V3 914 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 BRD7Q9NPI1 651 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 CRTAC1Q9NQ79 661 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 ST7Q9NRC1 585 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 METTL5Q9NRN9 209 aaKnown RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 HSFX1Q9UBD0 423 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 VTI1BQ9UEU0 232 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 PACSIN2Q9UNF0 486 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-205ENST00000472928 JRKLQ9Y4A0 524 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 HYOU1Q9Y4L1 999 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 MRFAP1Q9Y605 127 aa6.63□□□□□ -1.35
HDAC1-205ENST00000472928 NOTCH2Q04721 2471 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 PIEZO2Q9H5I5 2752 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 K7EQS6 105 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 TULP2O00295 520 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 PIK3R2O00459 728 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SCAMP3O14828 347 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 XPO1O14980 1071 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 ST8SIA5O15466 376 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SPOPO43791 374 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 TADA3O75528 432 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 C1QL1O75973 258 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 PRB1P04280 392 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 THBS1P07996 1170 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 FAM157BP0CG42 384 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 CD59P13987 128 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 HMGA1P17096 107 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 ITPKAP23677 461 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 P2RY2P41231 377 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 GPD2P43304 727 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 GSCP56915 257 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 SLC8A3P57103 927 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 MAMLD1Q13495 774 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 ZNF268Q14587 947 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 LBRQ14739 615 aaKnown RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 TCEAL1Q15170 157 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 PDGFRLQ15198 375 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 GAB4Q2WGN9 574 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 EFHC2Q5JST6 749 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 FAM102AQ5T9C2 384 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 MEI1Q5TIA1 1274 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 PEAR1Q5VY43 1037 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-205ENST00000472928 OR6B2Q6IFH4 312 aa6.62□□□□□ -1.35
HDAC1-205ENST00000472928 PLEKHA7Q6IQ23 1121 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms