RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SLC25A13Q9UJS0 675 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 VPS28Q9UK41 221 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 STAP1Q9ULZ2 295 aa23.19■■□□□ 1.3
C9orf3-213ENST00000471978 FAM170AA1A519 330 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 H0Y8X5 98 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 ADCY5O95622 1261 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 UCHL3P15374 230 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 TFE3P19532 575 aaPredicted RBP23.18■■□□□ 1.3
C9orf3-213ENST00000471978 CTSKP43235 329 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 GABRB2P47870 512 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 CXCR3P49682 368 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 SULT1E1P49888 294 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 VASPP50552 380 aaPredicted RBP23.18■■□□□ 1.3
C9orf3-213ENST00000471978 ADPRHP54922 357 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 C21orf59P57076 290 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 C5orf22Q49AR2 442 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 ACCSLQ4AC99 568 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 TCP11X2Q5H9J9 407 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 BRMS1LQ5PSV4 323 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 SLCO6A1Q86UG4 719 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 ERICH1Q86X53 443 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 BAHD1Q8TBE0 780 aaPredicted RBP23.18■■□□□ 1.3
C9orf3-213ENST00000471978 CDC6Q99741 560 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 NAA15Q9BXJ9 866 aaKnown RBP23.18■■□□□ 1.3
C9orf3-213ENST00000471978 TKTL2Q9H0I9 626 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 EBF2Q9HAK2 575 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 ARHGEF38Q9NXL2 777 aa23.18■■□□□ 1.3
C9orf3-213ENST00000471978 VILLO15195 856 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 ATP9BO43861 1147 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 EEF1GP26641 437 aaKnown RBP23.17■■□□□ 1.3
C9orf3-213ENST00000471978 CCT8P50990 548 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 CCR5P51681 352 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 CDH4P55283 916 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 CT47A1Q5JQC4 288 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-213ENST00000471978 FAM102AQ5T9C2 384 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-213ENST00000471978 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-213ENST00000471978 DSG4Q86SJ6 1040 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 XYLT1Q86Y38 959 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 ZCCHC14Q8WYQ9 949 aaKnown RBP23.17■■□□□ 1.3
C9orf3-213ENST00000471978 NT5C3BQ969T7 300 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 MUC3BQ9H195 1237 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 ANLNQ9NQW6 1124 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 BTBD3Q9Y2F9 522 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D30Q9Y2I9 924 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 OR51B4Q9Y5P0 310 aa23.17■■□□□ 1.3
C9orf3-213ENST00000471978 NYNRINQ9P2P1 1898 aaKnown RBP23.17■■□□□ 1.3
C9orf3-213ENST00000471978 CABIN1Q9Y6J0 2220 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 PLXNA2O75051 1894 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 TMEM131Q92545 1883 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 CNTN5O94779 1100 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 F9P00740 461 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 SCNN1AP37088 669 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 DEUP1Q05D60 604 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 DLG2Q15700 870 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 NOP9Q86U38 636 aaKnown RBP23.16■■□□□ 1.3
C9orf3-213ENST00000471978 OR8D1Q8WZ84 308 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 SKA1Q96BD8 255 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 PGAP3Q96FM1 320 aaPredicted RBP23.16■■□□□ 1.3
C9orf3-213ENST00000471978 TBCBQ99426 244 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 STK33Q9BYT3 514 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 AASDHPPTQ9NRN7 309 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 TAB2Q9NYJ8 693 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 PAXBP1Q9Y5B6 917 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 SNX10Q9Y5X0 201 aa23.16■■□□□ 1.3
C9orf3-213ENST00000471978 DSPP15924 2871 aaKnown RBP23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3DA0A087WVF3 549 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3IA0A087WXS9 549 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3EA0A087X179 549 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3KA0A087X1G2 549 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3FA6NER0 549 aaPredicted RBP23.15■■□□□ 1.3
C9orf3-213ENST00000471978 C10orf142B7Z368 130 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3LB9A6J9 549 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 I6L893 689 aaPredicted RBP23.15■■□□□ 1.3
C9orf3-213ENST00000471978 PCDHGA12O60330 932 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 DFNA5O60443 496 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 LSM8O95777 96 aaKnown RBP23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3HP0C7X1 549 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 DRD3P35462 400 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 METAP1P53582 386 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 IL9RQ01113 521 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 SLC25A52Q3SY17 297 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 C2CD6Q53TS8 623 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 FAM46CQ5VWP2 391 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3GQ6DHY5 549 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3CQ6IPX1 549 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 TBC1D3Q8IZP1 549 aaPredicted RBP23.15■■□□□ 1.3
C9orf3-213ENST00000471978 SARDHQ9UL12 918 aa23.15■■□□□ 1.3
C9orf3-213ENST00000471978 F8VZ95 297 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 GOLGA8SH3BPF8 625 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 PLK4O00444 970 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 WNT1P04628 370 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 RHOCP08134 193 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 ATXN1LP0C7T5 689 aaKnown RBP23.14■■□□□ 1.29
C9orf3-213ENST00000471978 ZNF18P17022 549 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 CD38P28907 300 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 GRK6P43250 576 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 KRT83P78385 493 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 ALFQ53S48 1182 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 LRRC31Q6UY01 552 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 Q6ZVU0 165 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms