RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PABPC1P11940 636 aaKnown RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 SMARCB1Q12824 385 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 C16orf89Q6UX73 402 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 NIPA1Q7RTP0 329 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 BSNDQ8WZ55 320 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 UBE2E3Q969T4 207 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 ACDQ96AP0 544 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.73□□□□□ -1.01
CD47-204ENST00000471694 ARHGEF4Q9NR80 690 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 CATSPERZQ9NTU4 200 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 GRID1Q9ULK0 1009 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 RBM7Q9Y580 266 aaKnown RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 NOX1Q9Y5S8 564 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 C1orf232A0A0U1RR37 186 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 RNF103O00237 685 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 KPNA5O15131 536 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 SPAG6O75602 509 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 SEC31AO94979 1220 aaKnown RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 DGKAP23743 735 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 SLC8A1P32418 973 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 TROAPQ12815 778 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 BMPR2Q13873 1038 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 FUT10Q6P4F1 479 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 STRA8Q7Z7C7 330 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 PMEPA1Q969W9 287 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 PPP1R10Q96QC0 940 aaKnown RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 LGMNQ99538 433 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 UNKQ9C0B0 810 aaKnown RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 ZYG11BQ9C0D3 744 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 PARVBQ9HBI1 364 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 HECAQ9UBI9 543 aaPredicted RBP8.73□□□□□ -1.01
CD47-204ENST00000471694 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
CD47-204ENST00000471694 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 SMIM35A0A1B0GVV1 85 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 PSTPIP1O43586 416 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 MLYCDO95822 493 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 VAV1P15498 845 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 NUP62P37198 522 aaPredicted RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 STX4Q12846 297 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 GRM3Q14832 879 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 NR6A1Q15406 480 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 DUSP28Q4G0W2 176 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 GPAT3Q53EU6 434 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 TSHZ1Q6ZSZ6 1077 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 PRSS58Q8IYP2 241 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 WRAP53Q9BUR4 548 aaKnown RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 TLR9Q9NR96 1032 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 MAT2BQ9NZL9 334 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 FAM153AQ9UHL3 310 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 PCDHAC2Q9Y5I4 1007 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 SALL1Q9NSC2 1324 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 USP27XA6NNY8 438 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 H3BMM5 538 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 AP3D1O14617 1153 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 ELP6Q0PNE2 266 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 LYPLAL1Q5VWZ2 237 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 POMZP3Q6PJE2 187 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 VPS33AQ96AX1 596 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 ZNF354BQ96LW1 612 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 WDR18Q9BV38 432 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 SLC39A8Q9C0K1 460 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 RABGEF1Q9UJ41 708 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 TTC26A0AVF1 554 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 IDSP22304 550 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 MAGOHP61326 146 aaKnown RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 SHC4Q6S5L8 630 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 GALNT7Q86SF2 657 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 P3H2Q8IVL5 708 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 INTS13Q9NVM9 706 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 ABCA6Q8N139 1617 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 AIM2O14862 343 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 TREHO43280 583 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 PRNPP04156 253 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 CSNK2BP67870 215 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 HTRA3P83110 453 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 CSTF3Q12996 717 aaKnown RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 ATP6AP1LQ52LC2 224 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 PLPPR4Q7Z2D5 763 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 SIRT2Q8IXJ6 389 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 STK40Q8N2I9 435 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 CCDC185Q8N715 623 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 OR6K2Q8NGY2 324 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 SMPDL3BQ92485 455 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 VPS45Q9NRW7 570 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 TUBGCP4Q9UGJ1 667 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 QSOX1O00391 747 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 NPR3P17342 541 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 PLD3Q8IV08 490 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 RAVER1Q8IY67 606 aaKnown RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 MAML3Q96JK9 1138 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 ZBTB45Q96K62 511 aaPredicted RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 DPYSL5Q9BPU6 564 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 CREBZFQ9NS37 354 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 TAS2R13Q9NYV9 303 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 TMEM191CA6NGB0 347 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 INPPL1O15357 1258 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 FGF10O15520 208 aaPredicted RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 ZNF862O60290 1169 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms