RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 CDH4P55283 916 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 YBEYP58557 167 aaPredicted RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 SLC7A9P82251 487 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 SARNPP82979 210 aaKnown RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 SMAD3P84022 425 aaKnown RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 CYP4F8P98187 520 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 MSS51Q4VC12 460 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 TTMPQ5BVD1 217 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 DNAJC21Q5F1R6 531 aaKnown RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 AGBL2Q5U5Z8 902 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 ELMSAN1Q6PJG2 1045 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 ARHGAP36Q6ZRI8 547 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 CHST9Q7L1S5 443 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 PID1Q7Z2X4 250 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 CAND1Q86VP6 1230 aaKnown RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 DENND1CQ8IV53 801 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 FAM217AQ8IXS0 508 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 KLHDC8BQ8IXV7 354 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 LGI2Q8N0V4 545 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 ARL14EPQ8N8R7 260 aaPredicted RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 LEMD2Q8NC56 503 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 MICAL1Q8TDZ2 1067 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 ADAMTS19Q8TE59 1207 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 SLC22A17Q8WUG5 538 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 MAML1Q92585 1016 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 ARL8AQ96BM9 186 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 LRRC39Q96DD0 335 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 MYEOVQ96EZ4 313 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 PGM2Q96G03 612 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 ATP6V1G3Q96LB4 118 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 PPP1R2P1Q96PQ5 205 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 SLC22A12Q96S37 553 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 CORO1BQ9BR76 489 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 WDR83Q9BRX9 315 aaKnown RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 ROPN1BQ9BZX4 212 aaPredicted RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 PPCSQ9HAB8 311 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 ROPN1Q9HAT0 212 aaPredicted RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 LRRC4CQ9HCJ2 640 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 GKN1Q9NS71 199 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 DPP7Q9UHL4 492 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 AGO1Q9UL18 857 aaKnown RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 YBX2Q9Y2T7 364 aaKnown RBP9.6□□□□□ -0.87
VPS52-216ENST00000471309 CPQQ9Y646 472 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 TEX264Q9Y6I9 313 aa9.6□□□□□ -0.87
VPS52-216ENST00000471309 TRAV19A0A0A6YYK7 116 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 A0A1B0GVM2 712 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 GOLGA6CA6NDK9 693 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 TCAF2A6NFQ2 919 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 CCL16O15467 120 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 ZBTB24O43167 697 aaPredicted RBP9.59□□□□□ -0.87
VPS52-216ENST00000471309 CACNG3O60359 315 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 GREM1O60565 184 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 CLDN11O75508 207 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 BANF1O75531 89 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 SPAG6O75602 509 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 CSPG5O95196 566 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 AP2A1O95782 977 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 PEX11BO96011 259 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 CKMP06732 381 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 GOLGA6DP0CG33 693 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 IRF1P10914 325 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 HDCP19113 662 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 DDX6P26196 483 aaKnown RBP eCLIP9.59□□□□□ -0.87
VPS52-216ENST00000471309 OR1E1P30953 314 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 CD68P34810 354 aaPredicted RBP9.59□□□□□ -0.87
VPS52-216ENST00000471309 LMAN1P49257 510 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 TNK2Q07912 1038 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 IL10RBQ08334 325 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 GPM6BQ13491 265 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 STAT4Q14765 748 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 BBS9Q3SYG4 887 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 SYCP2LQ5T4T6 812 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 TXNDC8Q6A555 127 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 LRRC8BQ6P9F7 803 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 RFWD3Q6PCD5 774 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 Q6ZNB5 142 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 CIR1Q86X95 450 aaPredicted RBP9.59□□□□□ -0.87
VPS52-216ENST00000471309 ANKMY2Q8IV38 441 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 HS6ST3Q8IZP7 471 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 FBXO36Q8NEA4 188 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 PYROXD1Q8WU10 500 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 WBP2Q969T9 261 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 ZBTB9Q96C00 473 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 HMCESQ96FZ2 354 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 CYP2S1Q96SQ9 504 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 GORASP1Q9BQQ3 440 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 CCDC77Q9BR77 488 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 LMAN2LQ9H0V9 348 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 STMN4Q9H169 189 aaPredicted RBP9.59□□□□□ -0.87
VPS52-216ENST00000471309 ATXN3LQ9H3M9 355 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 SP110Q9HB58 689 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 SMPD4Q9NXE4 827 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 ZDHHC7Q9NXF8 308 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 GOLGA6AQ9NYA3 693 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 VPS18Q9P253 973 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 FETUBQ9UGM5 382 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 IPO11Q9UI26 975 aaKnown RBP9.59□□□□□ -0.87
VPS52-216ENST00000471309 CHMP2BQ9UQN3 213 aa9.59□□□□□ -0.87
VPS52-216ENST00000471309 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.59□□□□□ -0.87
VPS52-216ENST00000471309 ZFP37Q9Y6Q3 630 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms