RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 TAS2R38P59533 333 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 NUCB2P80303 420 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 SRSF6Q13247 344 aaKnown RBP13.19□□□□□ -0.3
LAMP1-202ENST00000471046 CDH18Q13634 790 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 NUGGCQ68CJ6 796 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 GUSBP11Q6P575 273 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 CLEC17AQ6ZS10 378 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 SLC22A18ASQ8N1D0 253 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 CFAP52Q8N1V2 620 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 OR13H1Q8NG92 308 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 FRS2Q8WU20 508 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 KLK6Q92876 244 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 EXTL1Q92935 676 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 ARRDC3Q96B67 414 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 NOX5Q96PH1 765 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 SPAG5Q96R06 1193 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 CCNL2Q96S94 520 aaPredicted RBP13.19□□□□□ -0.3
LAMP1-202ENST00000471046 CALN1Q9BXU9 219 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 ABCG4Q9H172 646 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 LRRC4Q9HBW1 653 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 CISHQ9NSE2 258 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 TSPAN16Q9UKR8 245 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 ATXN7L1Q9ULK2 861 aaPredicted RBP13.19□□□□□ -0.3
LAMP1-202ENST00000471046 MYO9AB2RTY4 2548 aa13.19□□□□□ -0.3
LAMP1-202ENST00000471046 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 SPTAN1Q13813 2472 aaKnown RBP13.18□□□□□ -0.3
LAMP1-202ENST00000471046 PVALEFA0A1B0GWK0 134 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 GABBR2O75899 941 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 DUSP3P51452 185 aaPredicted RBP13.18□□□□□ -0.3
LAMP1-202ENST00000471046 PDX1P52945 283 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 TBX4P57082 545 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
LAMP1-202ENST00000471046 STK4Q13043 487 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 DRAP1Q14919 205 aaPredicted RBP13.18□□□□□ -0.3
LAMP1-202ENST00000471046 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 SGO2Q562F6 1265 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 MS4A13Q5J8X5 152 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 RNF219Q5W0B1 726 aaPredicted RBP13.18□□□□□ -0.3
LAMP1-202ENST00000471046 FOXR1Q6PIV2 292 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 SHC4Q6S5L8 630 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 GCNT7Q6ZNI0 430 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 UNC45BQ8IWX7 931 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 GRAMD1CQ8IYS0 662 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 IQUBQ8NA54 791 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 LINC00301Q8NCQ3 95 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 SEMA4DQ92854 862 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 AZIN2Q96A70 460 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 FCRL2Q96LA5 508 aaPredicted RBP13.18□□□□□ -0.3
LAMP1-202ENST00000471046 DNAI2Q9GZS0 605 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 MMRN2Q9H8L6 949 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 MAGEF1Q9HAY2 307 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 PREBQ9HCU5 417 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 CEP83Q9Y592 693 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 SDK2Q58EX2 2172 aa13.18□□□□□ -0.3
LAMP1-202ENST00000471046 ANKRD36A6QL64 1941 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 TYW5A2RUC4 315 aaKnown RBP13.17□□□□□ -0.3
LAMP1-202ENST00000471046 PDXKO00764 312 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 SCAMP1O15126 338 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 SLC31A1O15431 190 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 RNGTTO60942 597 aaKnown RBP13.17□□□□□ -0.3
LAMP1-202ENST00000471046 MOCS3O95396 460 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 AFPP02771 609 aaKnown RBP13.17□□□□□ -0.3
LAMP1-202ENST00000471046 AFMP43652 599 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 SLC8A3P57103 927 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 STK38Q15208 465 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 CDKN3Q16667 212 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 ZNF542PQ5EBM4 170 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 PERM1Q5SV97 790 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 PIP5KL1Q5T9C9 394 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 CRTC1Q6UUV9 634 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 EFL1Q7Z2Z2 1120 aaKnown RBP13.17□□□□□ -0.3
LAMP1-202ENST00000471046 SIX6OS1Q8N1H7 587 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 SCML4Q8N228 414 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 ZNF548Q8NEK5 533 aaPredicted RBP13.17□□□□□ -0.3
LAMP1-202ENST00000471046 CLEC4CQ8WTT0 213 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 OR8D1Q8WZ84 308 aa13.17□□□□□ -0.3
LAMP1-202ENST00000471046 XPO7Q9UIA9 1087 aaKnown RBP13.17□□□□□ -0.3
LAMP1-202ENST00000471046 TEP1Q99973 2627 aaKnown RBP13.16□□□□□ -0.3
LAMP1-202ENST00000471046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.16□□□□□ -0.3
LAMP1-202ENST00000471046 MAPK13O15264 365 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 POLR2DO15514 142 aaKnown RBP13.16□□□□□ -0.3
LAMP1-202ENST00000471046 TNFSF15O95150 251 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 F13A1P00488 732 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 FAM87AP0C7U9 286 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
LAMP1-202ENST00000471046 GP1BBP13224 206 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
LAMP1-202ENST00000471046 LCP1P13796 627 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 PDCP20941 246 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
LAMP1-202ENST00000471046 CLDN2P57739 230 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 ZNF177Q13360 481 aaPredicted RBP13.16□□□□□ -0.3
LAMP1-202ENST00000471046 ZNF284Q2VY69 593 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 OR6B2Q6IFH4 312 aa13.16□□□□□ -0.3
LAMP1-202ENST00000471046 ZCCHC8Q6NZY4 707 aaKnown RBP13.16□□□□□ -0.3
LAMP1-202ENST00000471046 RBM44Q6ZP01 1051 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms