RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PIP4K2CQ8TBX8 421 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 KLK6Q92876 244 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 BTN2A3PQ96KV6 586 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 SCUBE2Q9NQ36 999 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 GDF3Q9NR23 364 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
HDAC3-204ENST00000469207 A0A087WV48 116 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 LATO43561 262 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
HDAC3-204ENST00000469207 RFPL3O75679 317 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 ZIC2O95409 532 aaPredicted RBP12.63□□□□□ -0.39
HDAC3-204ENST00000469207 ADH1BP00325 375 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 MT-CO1P00395 513 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 GNA15P30679 374 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 NNMTP40261 264 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 USP8P40818 1118 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 EIF2S3P41091 472 aaKnown RBP12.63□□□□□ -0.39
HDAC3-204ENST00000469207 ACADVLP49748 655 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 SFSWAPQ12872 951 aaKnown RBP12.63□□□□□ -0.39
HDAC3-204ENST00000469207 PDCLQ13371 301 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 MORC3Q14149 939 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 BEND5Q7L4P6 421 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 KANSL1Q7Z3B3 1105 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 ATP6V0D2Q8N8Y2 350 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 STK32AQ8WU08 396 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 TSC1Q92574 1164 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 RNF34Q969K3 372 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 SKA1Q96BD8 255 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 CPXM1Q96SM3 734 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 MYOCQ99972 504 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 FEM1AQ9BSK4 669 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 THAP9Q9H5L6 903 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 FAM204AQ9H8W3 233 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC3-204ENST00000469207 AJAP1Q9UKB5 411 aaPredicted RBP12.63□□□□□ -0.39
HDAC3-204ENST00000469207 VANGL2Q9ULK5 521 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC3-204ENST00000469207 RAI2Q9Y5P3 530 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 SNX10Q9Y5X0 201 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 AK5Q9Y6K8 562 aa12.63□□□□□ -0.39
HDAC3-204ENST00000469207 K7ERQ8 282 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 SART1O43290 800 aaKnown RBP12.62□□□□□ -0.39
HDAC3-204ENST00000469207 PLRG1O43660 514 aaKnown RBP12.62□□□□□ -0.39
HDAC3-204ENST00000469207 MYF5P13349 255 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 PLK1P53350 603 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 TAS2R38P59533 333 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 NME3Q13232 169 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 AUHQ13825 339 aaKnown RBP12.62□□□□□ -0.39
HDAC3-204ENST00000469207 ELAVL3Q14576 367 aaKnown RBP12.62□□□□□ -0.39
HDAC3-204ENST00000469207 DLG2Q15700 870 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 INAVAQ3KP66 663 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 HES3Q5TGS1 186 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 FBXL19Q6PCT2 694 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 FAM183BPQ6ZVS7 135 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 Q6ZVU0 165 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
HDAC3-204ENST00000469207 SLC25A45Q8N413 288 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 MFSD2AQ8NA29 543 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 RPRD1AQ96P16 312 aaPredicted RBP12.62□□□□□ -0.39
HDAC3-204ENST00000469207 SPAG5Q96R06 1193 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 MED15Q96RN5 788 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 SIK2Q9H0K1 926 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 PLCB1Q9NQ66 1216 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 ANLNQ9NQW6 1124 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 DDIT4Q9NX09 232 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 PPM1HQ9ULR3 514 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 PCDHGA1Q9Y5H4 931 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 HS3ST4Q9Y661 456 aa12.62□□□□□ -0.39
HDAC3-204ENST00000469207 ARID1BQ8NFD5 2236 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-204ENST00000469207 MYLKQ15746 1914 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 A0A1B0GVM2 712 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 TCAF2A6NFQ2 919 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 I6L893 689 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-204ENST00000469207 TRIM38O00635 465 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 SLC31A1O15431 190 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 MED7O43513 233 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 SNAP91O60641 907 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 PAGE1O75459 146 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 CNTN5O94779 1100 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 ERBB2P04626 1255 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 CTSLP07711 333 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 PNMA6AP0CW24 399 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-204ENST00000469207 ZNF18P17022 549 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 TFE3P19532 575 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-204ENST00000469207 RXRGP48443 463 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 ARRB1P49407 418 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-204ENST00000469207 MARSP56192 900 aaKnown RBP12.61□□□□□ -0.39
HDAC3-204ENST00000469207 CDK17Q00537 523 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 SLC12A1Q13621 1099 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 STAT4Q14765 748 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 ALFQ53S48 1182 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 AGBL4Q5VU57 503 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 SFMBT2Q5VUG0 894 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 OR6B2Q6IFH4 312 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 OR8D1Q8WZ84 308 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 FAM131CQ96AQ9 280 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 PPP1R13BQ96KQ4 1090 aa12.61□□□□□ -0.39
HDAC3-204ENST00000469207 SLC2A13Q96QE2 648 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms