RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 OR14C36Q8NHC7 312 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 SARDHQ9UL12 918 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 DOCK4Q8N1I0 1966 aa25.2■■□□□ 1.62
PTCH1-210ENST00000468211 GOLGA4Q13439 2230 aaKnown RBP25.2■■□□□ 1.62
PTCH1-210ENST00000468211 GOLGA8CPA6NN73 597 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 PCDHGA12O60330 932 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 DKK1O94907 266 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 ADCY5O95622 1261 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 NNMTP40261 264 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 CCT8P50990 548 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 CCR5P51681 352 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 PPP2CBP62714 309 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 PPP2CAP67775 309 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 SULT2A1Q06520 285 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 SUZ12Q15022 739 aaKnown RBP25.19■■□□□ 1.62
PTCH1-210ENST00000468211 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.19■■□□□ 1.62
PTCH1-210ENST00000468211 MARCH9Q86YJ5 346 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 NPY6RQ99463 290 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 CDC6Q99741 560 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 TUBGCP2Q9BSJ2 902 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 ACE2Q9BYF1 805 aaPredicted RBP25.19■■□□□ 1.62
PTCH1-210ENST00000468211 SIK2Q9H0K1 926 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 SYNCQ9H7C4 482 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 SNX10Q9Y5X0 201 aa25.19■■□□□ 1.62
PTCH1-210ENST00000468211 A0A1W2PR77 199 aa25.18■■□□□ 1.62
PTCH1-210ENST00000468211 CNTN5O94779 1100 aa25.18■■□□□ 1.62
PTCH1-210ENST00000468211 PRKCSHP14314 528 aaPredicted RBP25.18■■□□□ 1.62
PTCH1-210ENST00000468211 C21orf59P57076 290 aa25.18■■□□□ 1.62
PTCH1-210ENST00000468211 RNASE9P60153 205 aaKnown RBP25.18■■□□□ 1.62
PTCH1-210ENST00000468211 DRAP1Q14919 205 aaPredicted RBP25.18■■□□□ 1.62
PTCH1-210ENST00000468211 SHBQ15464 509 aa25.18■■□□□ 1.62
PTCH1-210ENST00000468211 C5orf22Q49AR2 442 aa25.18■■□□□ 1.62
PTCH1-210ENST00000468211 TMPRSS4Q9NRS4 437 aa25.18■■□□□ 1.62
PTCH1-210ENST00000468211 CHMP5Q9NZZ3 219 aa25.18■■□□□ 1.62
PTCH1-210ENST00000468211 FHOD1Q9Y613 1164 aa25.18■■□□□ 1.62
PTCH1-210ENST00000468211 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.17■■□□□ 1.62
PTCH1-210ENST00000468211 A0A1B0GTQ1 180 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 ATP9BO43861 1147 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 OXCT1P55809 520 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 ZNF177Q13360 481 aaPredicted RBP25.17■■□□□ 1.62
PTCH1-210ENST00000468211 RAPGEF1Q13905 1077 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 ACCSLQ4AC99 568 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 ALFQ53S48 1182 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 SMYD5Q6GMV2 418 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 GATAD2AQ86YP4 633 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 FAM131CQ96AQ9 280 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 SPAG5Q96R06 1193 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 AASDHPPTQ9NRN7 309 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 SAMSN1Q9NSI8 373 aaKnown RBP25.17■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D30Q9Y2I9 924 aa25.17■■□□□ 1.62
PTCH1-210ENST00000468211 LAMA5O15230 3695 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 RTN2O75298 545 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 CYP11B1P15538 503 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 CDH5P33151 784 aaPredicted RBP25.16■■□□□ 1.62
PTCH1-210ENST00000468211 GRK6P43250 576 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 CXCR3P49682 368 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 VASPP50552 380 aaPredicted RBP25.16■■□□□ 1.62
PTCH1-210ENST00000468211 DLG2Q15700 870 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 POM121L1PQ3SYA9 428 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 C2CD6Q53TS8 623 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 Q6ZVU0 165 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 PROSER1Q86XN7 944 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 FAM114A1Q8IWE2 563 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 ZNF683Q8IZ20 524 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 NT5C3BQ969T7 300 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 NAA15Q9BXJ9 866 aaKnown RBP25.16■■□□□ 1.62
PTCH1-210ENST00000468211 TKTL2Q9H0I9 626 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 ARHGEF38Q9NXL2 777 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.16■■□□□ 1.62
PTCH1-210ENST00000468211 SLC25A13Q9UJS0 675 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 VPS28Q9UK41 221 aa25.16■■□□□ 1.62
PTCH1-210ENST00000468211 COL5A1P20908 1838 aaPredicted RBP25.16■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3DA0A087WVF3 549 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3IA0A087WXS9 549 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3EA0A087X179 549 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3KA0A087X1G2 549 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3FA6NER0 549 aaPredicted RBP25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3LB9A6J9 549 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 CLDN11O75508 207 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 MT-CO1P00395 513 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3HP0C7X1 549 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 ERCC5P28715 1186 aaPredicted RBP25.15■■□□□ 1.62
PTCH1-210ENST00000468211 CD38P28907 300 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 GABRB2P47870 512 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 SULT1E1P49888 294 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 SNX16P57768 344 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 ARTNQ5T4W7 220 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 KLHDC7AQ5VTJ3 777 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TAF3Q5VWG9 929 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3GQ6DHY5 549 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3CQ6IPX1 549 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TRNP1Q6NT89 227 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TMPRSS7Q7RTY8 843 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBC1D3Q8IZP1 549 aaPredicted RBP25.15■■□□□ 1.62
PTCH1-210ENST00000468211 SH2D3CQ8N5H7 860 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TMEM35BQ8NCS4 154 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 OR8D1Q8WZ84 308 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 SERAC1Q96JX3 654 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 TBCBQ99426 244 aa25.15■■□□□ 1.62
PTCH1-210ENST00000468211 PSMB7Q99436 277 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms