RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 MAPKAPK2P49137 400 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 MAGOHP61326 146 aaKnown RBP12.58□□□□□ -0.4
HDLBP-231ENST00000467435 ANO4Q32M45 955 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 C5orf22Q49AR2 442 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 PABPC1LQ4VXU2 614 aaKnown RBP12.58□□□□□ -0.4
HDLBP-231ENST00000467435 RABGAP1LQ5R372 815 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 KDM7AQ6ZMT4 941 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 TMC8Q8IU68 726 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 LRRC49Q8IUZ0 686 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 IGDCC3Q8IVU1 814 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 AGGF1Q8N302 714 aaeCLIP12.58□□□□□ -0.4
HDLBP-231ENST00000467435 ELMOD1Q8N336 334 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 SPPL3Q8TCT6 385 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 AZIN2Q96A70 460 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 MYEOVQ96EZ4 313 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 HMCESQ96FZ2 354 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 TEKT5Q96M29 485 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 PRICKLE1Q96MT3 831 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-231ENST00000467435 GORASP1Q9BQQ3 440 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 RNF38Q9H0F5 515 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 SP110Q9HB58 689 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 SMPD4Q9NXE4 827 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 CTNNAL1Q9UBT7 734 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 ZNF212Q9UDV6 495 aa12.58□□□□□ -0.4
HDLBP-231ENST00000467435 ERI2A8K979 691 aaKnown RBP12.57□□□□□ -0.4
HDLBP-231ENST00000467435 MATN3O15232 486 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 RAMP2O60895 175 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 CDH16O75309 829 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 SPAG6O75602 509 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 ARHGEF15O94989 841 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 AP2A1O95782 977 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 OLFM2O95897 454 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 MYOGP15173 224 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 ATP5DP30049 168 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 GRIA1P42261 906 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 CYP4F8P98187 520 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 PRPSAP1Q14558 356 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.41e-34■■■■■ 53.3
HDLBP-231ENST00000467435 KLHL38Q2WGJ6 581 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 PARP15Q460N3 678 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 PPM1LQ5SGD2 360 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 LRRC8BQ6P9F7 803 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 RFWD3Q6PCD5 774 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 SPRED2Q7Z698 418 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 ZNF354CQ86Y25 554 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 RIBC1Q8N443 379 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-231ENST00000467435 ARFGAP2Q8N6H7 521 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 MRPL43Q8N983 215 aaKnown RBP12.57□□□□□ -0.4
HDLBP-231ENST00000467435 FBF1Q8TES7 1133 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 MRPS31Q92665 395 aaKnown RBP12.57□□□□□ -0.4
HDLBP-231ENST00000467435 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
HDLBP-231ENST00000467435 GCNAQ96QF7 691 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 IL12RB2Q99665 862 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 MLPHQ9BV36 600 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-231ENST00000467435 LRRC3Q9BY71 257 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 PPCSQ9HAB8 311 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 GKN1Q9NS71 199 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 LGALS13Q9UHV8 139 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 IPO11Q9UI26 975 aaKnown RBP12.57□□□□□ -0.4
HDLBP-231ENST00000467435 TTLL3Q9Y4R7 772 aa12.57□□□□□ -0.4
HDLBP-231ENST00000467435 POC1B-GALNT4F8VUJ3 575 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 CCL16O15467 120 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 NEBLO76041 1014 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 SUN1O94901 812 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 LATS1O95835 1130 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 KLKB1P03952 638 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 HLA-DQB2P05538 268 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 CDC25CP30307 473 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 OR1E1P30953 314 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 STX2P32856 288 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 ATP1A2P50993 1020 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 CLCN4P51793 760 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 CDH4P55283 916 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 PPP2R2AP63151 447 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 SMAD3P84022 425 aaKnown RBP12.56□□□□□ -0.4
HDLBP-231ENST00000467435 SKOR1P84550 965 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 SPARCL1Q14515 664 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 POLD3Q15054 466 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-231ENST00000467435 TMED2Q15363 201 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 TNFAIP8L3Q5GJ75 292 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 C9orf50Q5SZB4 431 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 TXNDC8Q6A555 127 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 C3orf62Q6ZUJ4 267 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 CFAP52Q8N1V2 620 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 CNTD1Q8N815 330 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 ARL14EPQ8N8R7 260 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-231ENST00000467435 ZSCAN18Q8TBC5 510 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-231ENST00000467435 SLC22A17Q8WUG5 538 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 MAML1Q92585 1016 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 FATE1Q969F0 183 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 WBP2Q969T9 261 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 STAMBPL1Q96FJ0 436 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 SIGLEC10Q96LC7 697 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 DDX50Q9BQ39 737 aaKnown RBP12.56□□□□□ -0.4
HDLBP-231ENST00000467435 ACSS3Q9H6R3 686 aa12.56□□□□□ -0.4
HDLBP-231ENST00000467435 MAN1C1Q9NR34 630 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms