RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 RPS6KB1P23443 525 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 CHMP24386 653 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 PSMA4P25789 261 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 BUD31P41223 144 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 MTNR1AP48039 350 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 ZXDAP98168 799 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 FHL2Q14192 279 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 SH2D4BQ5SQS7 431 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 SLC30A9Q6PML9 568 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 R3HCC1LQ7Z5L2 792 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 TFAP2DQ7Z6R9 452 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 UBE2Q1Q7Z7E8 422 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 KLBQ86Z14 1044 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 PNLDC1Q8NA58 520 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 GPR150Q8NGU9 434 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 C2CD4CQ8TF44 421 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 UCMAQ8WVF2 138 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 CNOT9Q92600 299 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 CENPIQ92674 756 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 ELP4Q96EB1 424 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 ADAD1Q96M93 576 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 FCRL5Q96RD9 977 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 CLSTN3Q9BQT9 956 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 MROH8Q9H579 483 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 TBC1D22BQ9NU19 505 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 ARL15Q9NXU5 204 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 TAS2R10Q9NYW0 307 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 TBC1D14Q9P2M4 693 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 IPO11Q9UI26 975 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 FBXO2Q9UK22 296 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 LAS1LQ9Y4W2 734 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 SCINQ9Y6U3 715 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 AOX1Q06278 1338 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 SMIM22K7EJ46 135 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 RRHO14718 337 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 STRNO43815 780 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 HBP1O60381 514 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 LCKP06239 509 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 BDNFP23560 247 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 CLNS1AP54105 237 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 SLC12A2P55011 1212 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 NAP1L1P55209 391 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 RHAGQ02094 409 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 MTA1Q13330 715 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 AWAT1Q58HT5 328 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 FAM69AQ5T7M9 428 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 NEK10Q6ZWH5 1172 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 TMTC3Q6ZXV5 915 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 H1FNTQ75WM6 255 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 SEMA6DQ8NFY4 1073 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 RUFY2Q8WXA3 655 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 RAB40AQ8WXH6 277 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 TREX2Q9BQ50 279 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 FBXO40Q9UH90 709 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 CNPY2Q9Y2B0 182 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 CLDN16Q9Y5I7 305 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 DMRT1Q9Y5R6 373 aa4.74□□□□□ -1.65
CDC42BPA-211ENST00000466538 OR6C68A6NDL8 312 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 INPPL1O15357 1258 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 KIF1CO43896 1103 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 PLAUP00749 431 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 IGLV2-14P01704 120 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 HSPA1AP0DMV8 641 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 HSPA1BP0DMV9 641 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 UBL4AP11441 157 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 COX7A2P14406 83 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 TFEBP19484 476 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 HOXA7P31268 230 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 SKIV2L2P42285 1042 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 CCR9P51686 369 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 TGFB2P61812 414 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 DCAF7P61962 342 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 IL13RA2Q14627 380 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 SLC18A3Q16572 532 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 AP5B1Q2VPB7 878 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 EARS2Q5JPH6 523 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 STRIP1Q5VSL9 837 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 CCDC30Q5VVM6 783 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 TMEM268Q5VZI3 342 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 SLC22A25Q6T423 547 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 PCSK4Q6UW60 755 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 NEK8Q86SG6 692 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 ARHGEF25Q86VW2 580 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 C8orf58Q8NAV2 365 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 SETD9Q8NE22 299 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 HSPH1Q92598 858 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 NELL1Q92832 810 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 FRG2BQ96QU4 278 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 EYA3Q99504 573 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 TM2D2Q9BX73 214 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 EPHX3Q9H6B9 360 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 Q9N2J8 555 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 SEMA4BQ9NPR2 832 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 BLOC1S4Q9NUP1 217 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 KCND2Q9NZV8 630 aa4.73□□□□□ -1.65
CDC42BPA-211ENST00000466538 ORC3Q9UBD5 711 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms