RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 BIRC5O15392 142 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 PMPCBO75439 489 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 GSRP00390 522 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 CD68P34810 354 aaPredicted RBP16.7■□□□□ 0.26
SLX4-202ENST00000466154 MPP3Q13368 585 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 PCSK7Q16549 785 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 TIGD5Q53EQ6 642 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 NRG4Q8WWG1 115 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 PPP1R10Q96QC0 940 aaKnown RBP16.7■□□□□ 0.26
SLX4-202ENST00000466154 TLE6Q9H808 572 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 FBXW11Q9UKB1 542 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 ZNF487B1APH4 448 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 PROCP04070 461 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 HUNKP57058 714 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 STEAP4Q687X5 459 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 LRRC74BQ6ZQY2 392 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 TAC4Q86UU9 113 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 SCN4BQ8IWT1 228 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 LMNTD2Q8IXW0 634 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 ZNF781Q8N8C0 355 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 PPFIBP2Q8ND30 876 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 MLPHQ9BV36 600 aaPredicted RBP16.7■□□□□ 0.26
SLX4-202ENST00000466154 RCOR3Q9P2K3 495 aaPredicted RBP16.7■□□□□ 0.26
SLX4-202ENST00000466154 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 ALDH1A2O94788 518 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 TOMM70O94826 608 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 AP2A1O95782 977 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 LMNAP02545 664 aaKnown RBP16.69■□□□□ 0.26
SLX4-202ENST00000466154 SCNN1AP37088 669 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 ATXN3P54252 364 aaPredicted RBP16.69■□□□□ 0.26
SLX4-202ENST00000466154 PAFAH1B3Q15102 231 aaKnown RBP16.69■□□□□ 0.26
SLX4-202ENST00000466154 SDHAF4Q5VUM1 108 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 NXNQ6DKJ4 435 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 ARCQ7LC44 396 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.69■□□□□ 0.26
SLX4-202ENST00000466154 CPNE1Q99829 537 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 SLC24A3Q9HC58 644 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 CAPN14A8MX76 684 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 TK2O00142 265 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 OR4Q2P0C623 313 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 GNAT1P11488 350 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 VHLP40337 213 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 ABCE1P61221 599 aaKnown RBP16.69■□□□□ 0.26
SLX4-202ENST00000466154 CTBP1Q13363 440 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 CUL3Q13618 768 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 RNF135Q8IUD6 432 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 PYDC1Q8WXC3 89 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 SLC2A13Q96QE2 648 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 BPTFQ12830 3046 aa16.69■□□□□ 0.26
SLX4-202ENST00000466154 SHROOM3Q8TF72 1996 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SIN3BO75182 1162 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SERPINA6P08185 405 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 THPOP40225 353 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 ITKQ08881 620 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 USP10Q14694 798 aaKnown RBP16.68■□□□□ 0.26
SLX4-202ENST00000466154 SPANXN3Q5MJ09 141 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SPDYAQ5MJ70 313 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 TCHHL1Q5QJ38 904 aaPredicted RBP16.68■□□□□ 0.26
SLX4-202ENST00000466154 PDPK2PQ6A1A2 396 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.68■□□□□ 0.26
SLX4-202ENST00000466154 UCMAQ8WVF2 138 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 GORASP1Q9BQQ3 440 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 NAT9Q9BTE0 207 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 CCDC106Q9BWC9 280 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SLC7A8Q9UHI5 535 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 TLK1Q9UKI8 766 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 TNPO2O14787 897 aaKnown RBP16.68■□□□□ 0.26
SLX4-202ENST00000466154 C2P06681 752 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 CD52P31358 61 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SERPINB5P36952 375 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 LHX1P48742 406 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 IDH3AP50213 366 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SLC34A1Q06495 639 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 GRTP1Q5TC63 336 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 NAPRTQ6XQN6 538 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 TIFABQ6ZNK6 161 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 URGCPQ8TCY9 931 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SLC26A7Q8TE54 656 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 RBBP8Q99708 897 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 WDR55Q9H6Y2 383 aaPredicted RBP16.68■□□□□ 0.26
SLX4-202ENST00000466154 IGSF9Q9P2J2 1179 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 VAPBO95292 243 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 CHRNGP07510 517 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SERPINB8P50452 374 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 ADAM17P78536 824 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 MAVSQ7Z434 540 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 CCNJLQ8IV13 435 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 CCNYL1Q8N7R7 359 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 ENDOVQ8N8Q3 282 aaKnown RBP16.68■□□□□ 0.26
SLX4-202ENST00000466154 APBB2Q92870 758 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 NT5C3BQ969T7 300 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 SMARCD1Q96GM5 515 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 MARK4Q96L34 752 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 TSNARE1Q96NA8 513 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 PANX3Q96QZ0 392 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 OMDQ99983 421 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 TMLHEQ9NVH6 421 aa16.68■□□□□ 0.26
SLX4-202ENST00000466154 MPP6Q9NZW5 540 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms