RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
SYNE4-204ENST00000465425 C17orf102A2RUQ5 167 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 TIMM44O43615 452 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 F9P00740 461 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 ALOX15P16050 662 aaPredicted RBP18.71■□□□□ 0.58
SYNE4-204ENST00000465425 CYP2B6P20813 491 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 ARRB2P32121 409 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 CPT1AP50416 773 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 MPP3Q13368 585 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 INTS6LQ5JSJ4 861 aaKnown RBP18.71■□□□□ 0.58
SYNE4-204ENST00000465425 VWA5B1Q5TIE3 1220 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 TMEM154Q6P9G4 183 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 GPRIN1Q7Z2K8 1008 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 PLD6Q8N2A8 252 aaKnown RBP18.71■□□□□ 0.58
SYNE4-204ENST00000465425 SLC25A41Q8N5S1 370 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 VAT1Q99536 393 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 APOL2Q9BQE5 337 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 COLEC11Q9BWP8 271 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 IL22Q9GZX6 179 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 VCXQ9H320 206 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 CAB39LQ9H9S4 337 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 RRN3Q9NYV6 651 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 OR12D3Q9UGF7 316 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 PCDHB12Q9Y5F1 795 aa18.71■□□□□ 0.58
SYNE4-204ENST00000465425 TIMM13Q9Y5L4 95 aaPredicted RBP18.71■□□□□ 0.58
SYNE4-204ENST00000465425 A0A088AWK7 358 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 I6L893 689 aaPredicted RBP18.7■□□□□ 0.58
SYNE4-204ENST00000465425 BAG2O95816 211 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 NFKB1P19838 968 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 NPY2RP49146 381 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 ZBTB17Q13105 803 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 FRG1Q14331 258 aaKnown RBP18.7■□□□□ 0.58
SYNE4-204ENST00000465425 OLFML2BQ68BL8 750 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 KCTD11Q693B1 232 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 ATG14Q6ZNE5 492 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 TMEM86AQ8N2M4 240 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 URGCPQ8TCY9 931 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 PGAP3Q96FM1 320 aaPredicted RBP18.7■□□□□ 0.58
SYNE4-204ENST00000465425 GPAMQ9HCL2 828 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 DNAJB4Q9UDY4 337 aa18.7■□□□□ 0.58
SYNE4-204ENST00000465425 ZNF638Q14966 1978 aaKnown RBP18.7■□□□□ 0.58
SYNE4-204ENST00000465425 MYBPHLA2RUH7 354 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 DPPA5A6NC42 116 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 UNCXA6NJT0 531 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 FKBP6O75344 327 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 F7P08709 466 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-204ENST00000465425 IGFBP6P24592 240 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-204ENST00000465425 CD68P34810 354 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-204ENST00000465425 ABCG1P45844 678 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 PRPSAP1Q14558 356 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 GSTCDQ8NEC7 633 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 EDEM1Q92611 657 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 MLPHQ9BV36 600 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-204ENST00000465425 TKTL2Q9H0I9 626 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 CHRAC1Q9NRG0 131 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 CLEC11AQ9Y240 323 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 HAS3O00219 553 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 AMHP03971 560 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 GNAT1P11488 350 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 IRF9Q00978 393 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 GALNT2Q10471 571 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 USP4Q13107 963 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 DLG2Q15700 870 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 FSCBQ5H9T9 825 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 CTU1Q7Z7A3 348 aaKnown RBP18.69■□□□□ 0.58
SYNE4-204ENST00000465425 RNF34Q969K3 372 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 SHCBP1LQ9BZQ2 653 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 COG4Q9H9E3 785 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 NMRAL1Q9HBL8 299 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 IARS2Q9NSE4 1012 aaKnown RBP18.69■□□□□ 0.58
SYNE4-204ENST00000465425 UBP1Q9NZI7 540 aa18.69■□□□□ 0.58
SYNE4-204ENST00000465425 ZNF195O14628 629 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 C2P06681 752 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 YBX3P16989 372 aaKnown RBP eCLIP18.68■□□□□ 0.58
SYNE4-204ENST00000465425 ZNF135P52742 658 aaPredicted RBP18.68■□□□□ 0.58
SYNE4-204ENST00000465425 CSE1LP55060 971 aaKnown RBP18.68■□□□□ 0.58
SYNE4-204ENST00000465425 BEX3Q00994 111 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 CDH17Q12864 832 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 LBRQ14739 615 aaKnown RBP18.68■□□□□ 0.58
SYNE4-204ENST00000465425 RAB41Q5JT25 222 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 NAPEPLDQ6IQ20 393 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 RAPH1Q70E73 1250 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 ZNF781Q8N8C0 355 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 KATNAL1Q9BW62 490 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 CDH19Q9H159 772 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 MID2Q9UJV3 735 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 AP3B1O00203 1094 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 DCXO43602 365 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 TRIM13O60858 407 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 H2AFYO75367 372 aaKnown RBP18.68■□□□□ 0.58
SYNE4-204ENST00000465425 THP07101 528 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 TPH1P17752 444 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 CLCNKBP51801 687 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 EPHB1P54762 984 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 RALGPS1Q5JS13 557 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 ZMIZ2Q8NF64 920 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 UCMAQ8WVF2 138 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 SMARCD1Q96GM5 515 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 VPS39Q96JC1 886 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 TSNARE1Q96NA8 513 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms