RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ETNK2Q9NVF9 386 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 IGSF9Q9P2J2 1179 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 ZNF212Q9UDV6 495 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 EFR3BQ9Y2G0 817 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 OTOL1A6NHN0 477 aaPredicted RBP17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 DCLK1O15075 740 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 PPFIA2O75334 1257 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 ASGR2P07307 311 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 MPP7Q5T2T1 576 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 TMC3Q7Z5M5 1100 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 ADHFE1Q8IWW8 467 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 SLC44A3Q8N4M1 653 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 ATL2Q8NHH9 583 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 MAK16Q9BXY0 300 aaKnown RBP17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 CATSPERBQ9H7T0 1116 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 PLK2Q9NYY3 685 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 GRHL1Q9NZI5 618 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 MYO10Q9HD67 2058 aa17.37■□□□□ 0.37
EXOSC3-203ENST00000465229 WASH4PA8MWX3 477 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 ARNTLO00327 626 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 FGF10O15520 208 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 PENKP01210 267 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 CYBBP04839 570 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 CYP17A1P05093 508 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 HSD17B3P37058 310 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 RPL21P46778 160 aaKnown RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 CDH4P55283 916 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 TTC39BQ5VTQ0 682 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 RNF43Q68DV7 783 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 SLC9A4Q6AI14 798 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 DRICH1Q6PGQ1 229 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 ZDHHC24Q6UX98 284 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 TFAP2DQ7Z6R9 452 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 RFX6Q8HWS3 928 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 RTL3Q8N8U3 475 aaKnown RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 ATP2A3Q93084 1043 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 BBS2Q9BXC9 721 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 ECT2Q9H8V3 914 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 NDFIP2Q9NV92 336 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 TMEM248Q9NWD8 314 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 MARK1Q9P0L2 795 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 PRKAG3Q9UGI9 489 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 MFHAS1Q9Y4C4 1052 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 MYOFQ9NZM1 2061 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 A0A1B0GVM2 712 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 TCAF2A6NFQ2 919 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 CST8O60676 142 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 CLDN11O75508 207 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 TJP3O95049 919 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 NFATC1O95644 943 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 GAS8O95995 478 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 HOXD9P28356 352 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 LMNB2Q03252 620 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 ZP2Q05996 745 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 RUNX3Q13761 415 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 PTK6Q13882 451 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 TFDP2Q14188 446 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 ANO4Q32M45 955 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 CHST9Q7L1S5 443 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 C1orf54Q8WWF1 131 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 ATXN2LQ8WWM7 1075 aaKnown RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 TRIM31Q9BZY9 425 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 RETREG1Q9H6L5 497 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 BRD9Q9H8M2 597 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 GTSE1Q9NYZ3 720 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 WHRNQ9P202 907 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 MTRF1LQ9UGC7 380 aaKnown RBP17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 CLEC4EQ9ULY5 219 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 SNX24Q9Y343 169 aa17.36■□□□□ 0.37
EXOSC3-203ENST00000465229 VCANP13611 3396 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 TYW5A2RUC4 315 aaKnown RBP17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 NEDD8-MDP1E9PL57 170 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 ADH1CP00326 375 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 BMP1P13497 986 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 TYRP14679 529 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 DYNLT1P63172 113 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 PPP1R7Q15435 360 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 UAP1Q16222 522 aaPredicted RBP17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 NCBP2-AS2Q69YL0 99 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 BBS12Q6ZW61 710 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 PLD5Q8N7P1 536 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 ART4Q93070 314 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 KLC2Q9H0B6 622 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 PRDM16Q9HAZ2 1276 aa17.35■□□□□ 0.37
EXOSC3-203ENST00000465229 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 APOL1O14791 398 aa17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 HOXC11O43248 304 aaPredicted RBP17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 LUC7L3O95232 432 aaKnown RBP17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 ADH5P11766 374 aa17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 ZFXP17010 805 aaPredicted RBP17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 ITIH2P19823 946 aa17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 OR1E1P30953 314 aa17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 KCNJ1P48048 391 aa17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 PLTPP55058 493 aa17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 GAD2Q05329 585 aa17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 DHX9Q08211 1270 aaKnown RBP17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 ZNF177Q13360 481 aaPredicted RBP17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 PAFAH1B3Q15102 231 aaKnown RBP17.34■□□□□ 0.37
EXOSC3-203ENST00000465229 GAB4Q2WGN9 574 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms