RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 LGMNQ99538 433 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 SLC46A2Q9BY10 475 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 TSPYL1Q9H0U9 437 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 PRDM12Q9H4Q4 367 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 TASP1Q9H6P5 420 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 C10orf88Q9H8K7 445 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 SFXN1Q9H9B4 322 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 USP29Q9HBJ7 922 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 TMEM248Q9NWD8 314 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 GRHL1Q9NZI5 618 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 MPP6Q9NZW5 540 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 PAK5Q9P286 719 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 DNMT3BQ9UBC3 853 aaKnown RBP8.4□□□□□ -1.06
RPA3-205ENST00000462723 ANAPC5Q9UJX4 755 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 AGO1Q9UL18 857 aaKnown RBP8.4□□□□□ -1.06
RPA3-205ENST00000462723 NEU3Q9UQ49 428 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 ZNF510Q9Y2H8 683 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 SH3BP1Q9Y3L3 701 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 CHD9Q3L8U1 2897 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 NUP205Q92621 2012 aa8.4□□□□□ -1.06
RPA3-205ENST00000462723 HELZP42694 1942 aaKnown RBP8.4□□□□□ -1.06
RPA3-205ENST00000462723 DOCK6Q96HP0 2047 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 GOLGA6L7A0A1B0GV03 622 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 TYW5A2RUC4 315 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 C5orf60A6NFR6 353 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 EPOPA6NHQ4 379 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 RNF103O00237 685 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 DFFAO00273 331 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 DNALI1O14645 258 aaPredicted RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 GCATO75600 419 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 KLKB1P03952 638 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 ETS1P14921 441 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 IVDP26440 423 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 RPL22P35268 128 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 GARSP41250 739 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 CCR2P41597 374 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 MAPKAPK2P49137 400 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 NDST2P52849 883 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 ITGA8P53708 1063 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 ZNF33AQ06730 810 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 PPIDQ08752 370 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 MORF4L2Q15014 288 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 TEAD2Q15562 447 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 KCTD19Q17RG1 926 aaPredicted RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 C5orf22Q49AR2 442 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 FAM133BQ5BKY9 247 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 BEND6Q5SZJ8 279 aaPredicted RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 TTC39BQ5VTQ0 682 aaPredicted RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 ZDHHC24Q6UX98 284 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 ARHGEF18Q6ZSZ5 1173 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 CEP128Q6ZU80 1094 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 B4GALNT4Q76KP1 1039 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 GRASPQ7Z6J2 395 aaPredicted RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 TFAP2DQ7Z6R9 452 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 PRUNE1Q86TP1 453 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 NLRP14Q86W24 1093 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 UMODL1-AS1Q8N2C9 162 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 ATPAF2Q8N5M1 289 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 GLIS1Q8NBF1 620 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 FBXO25Q8TCJ0 367 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 ART4Q93070 314 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 CAVIN3Q969G5 261 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 IGSF8Q969P0 613 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 ZNF707Q96C28 371 aaPredicted RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 HDAC11Q96DB2 347 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 TCEAL4Q96EI5 215 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 P2RY11Q96G91 374 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 CELF6Q96J87 481 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 FMO2Q99518 471 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 KLC2Q9H0B6 622 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 NSUN3Q9H649 340 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 ZDHHC18Q9NUE0 388 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 CFAP97Q9P2B7 532 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 STOML2Q9UJZ1 356 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 TPX2Q9ULW0 747 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 ARHGAP26Q9UNA1 814 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 MRPS23Q9Y3D9 190 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 LAMA2P24043 3122 aaKnown RBP8.39□□□□□ -1.07
RPA3-205ENST00000462723 SHROOM3Q8TF72 1996 aa8.39□□□□□ -1.07
RPA3-205ENST00000462723 NOTCH4Q99466 2003 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
RPA3-205ENST00000462723 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 ARHGAP42A6NI28 874 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 RFXAPO00287 272 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 LEFTY2O00292 366 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 OPHN1O60890 802 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 RAMP2O60895 175 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 MOSPD3O75425 235 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 CLDN11O75508 207 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 CNTN5O94779 1100 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 PAPLNO95428 1278 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 VAV1P15498 845 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 CCNCP24863 283 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 ECHS1P30084 290 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 OR1E1P30953 314 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 SLC6A4P31645 630 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 IRAK1P51617 712 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 CDH4P55283 916 aa8.38□□□□□ -1.07
RPA3-205ENST00000462723 YBEYP58557 167 aaPredicted RBP8.38□□□□□ -1.07
RPA3-205ENST00000462723 NTHL1P78549 312 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms