RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 M0QYV0 167 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 RNGTTO60942 597 aaKnown RBP11.19□□□□□ -0.62
CBX3-205ENST00000462165 RTN2O75298 545 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 MOCS2O96007 188 aaPredicted RBP11.19□□□□□ -0.62
CBX3-205ENST00000462165 VAV1P15498 845 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 MAT2AP31153 395 aaKnown RBP11.19□□□□□ -0.62
CBX3-205ENST00000462165 SYKP43405 635 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 METAP1P53582 386 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 ERVPABLB-1P60509 514 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 DAB2P98082 770 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 SULT2A1Q06520 285 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 CNGA2Q16280 664 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 SETMARQ53H47 684 aaPredicted RBP11.19□□□□□ -0.62
CBX3-205ENST00000462165 HS1BP3Q53T59 392 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 DCAF17Q5H9S7 520 aaPredicted RBP11.19□□□□□ -0.62
CBX3-205ENST00000462165 AGBL4Q5VU57 503 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 BROXQ5VW32 411 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 FAM46CQ5VWP2 391 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 TMEM270Q6UE05 265 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 BEND5Q7L4P6 421 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 DSG4Q86SJ6 1040 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 LGI2Q8N0V4 545 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 FRS2Q8WU20 508 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 OR8D1Q8WZ84 308 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 KLHDC7BQ96G42 594 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 XPO7Q9UIA9 1087 aaKnown RBP11.19□□□□□ -0.62
CBX3-205ENST00000462165 SARDHQ9UL12 918 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 NAALADL1Q9UQQ1 740 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 BOD1L1Q8NFC6 3051 aa11.19□□□□□ -0.62
CBX3-205ENST00000462165 ALOX15BO15296 676 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 SLC16A3O15427 465 aaKnown RBP11.18□□□□□ -0.62
CBX3-205ENST00000462165 OPA1O60313 960 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 APOEP02649 317 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 MPOP05164 745 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 GIMD1P0DJR0 217 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 CKMT1AP12532 417 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 TACR2P21452 398 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 DGKAP23743 735 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 RPL34P49207 117 aaKnown RBP11.18□□□□□ -0.62
CBX3-205ENST00000462165 NDUFA8P51970 172 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 PLK1P53350 603 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 GABREP78334 506 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 RAP1GAP2Q684P5 730 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 TAC4Q86UU9 113 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 CHSY1Q86X52 802 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 TMEM145Q8NBT3 493 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 SNRNP27Q8WVK2 155 aaKnown RBP11.18□□□□□ -0.62
CBX3-205ENST00000462165 NAF1Q96HR8 494 aaKnown RBP11.18□□□□□ -0.62
CBX3-205ENST00000462165 BTN2A3PQ96KV6 586 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 DEPDC7Q96QD5 511 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 ZSWIM1Q9BR11 485 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 DPH1Q9BZG8 443 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 SEMA4CQ9C0C4 833 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 MIS12Q9H081 205 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 CPNE5Q9HCH3 593 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 PREBQ9HCU5 417 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 KLHL11Q9NVR0 708 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 TJP2Q9UDY2 1190 aa11.18□□□□□ -0.62
CBX3-205ENST00000462165 A0A1B0GVM2 712 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 C1QTNF3-AMACRE9PGA6 284 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 F5H5T6 163 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 RNF225M0QZC1 329 aaPredicted RBP11.17□□□□□ -0.62
CBX3-205ENST00000462165 SART1O43290 800 aaKnown RBP11.17□□□□□ -0.62
CBX3-205ENST00000462165 ATP9BO43861 1147 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 LZTS3O60299 673 aaPredicted RBP11.17□□□□□ -0.62
CBX3-205ENST00000462165 USP12O75317 370 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 PIAS2O75928 621 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 GP1BAP07359 652 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 THEGLP0DJG4 465 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
CBX3-205ENST00000462165 LSSP48449 732 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 OXCT1P55809 520 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 TAS2R38P59533 333 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 NUCB2P80303 420 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 CNTN1Q12860 1018 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 LRMPQ12912 555 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 PKP1Q13835 747 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 ARHGAP40Q5TG30 622 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 SYPL2Q5VXT5 272 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 KRBA2Q6ZNG9 492 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 CCAR2Q8N163 923 aaKnown RBP11.17□□□□□ -0.62
CBX3-205ENST00000462165 KCNE4Q8WWG9 221 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 SPOCK2Q92563 424 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 TTC9Q92623 222 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 ERCC4Q92889 916 aaPredicted RBP11.17□□□□□ -0.62
CBX3-205ENST00000462165 SNX21Q969T3 373 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 FAM149B1Q96BN6 582 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 ASCL3Q9NQ33 180 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 UCKL1Q9NWZ5 548 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 PPM1HQ9ULR3 514 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 CA5BQ9Y2D0 317 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 PCDHB4Q9Y5E5 795 aa11.17□□□□□ -0.62
CBX3-205ENST00000462165 BSNQ9UPA5 3926 aa11.16□□□□□ -0.62
CBX3-205ENST00000462165 COL12A1Q99715 3063 aa11.16□□□□□ -0.62
CBX3-205ENST00000462165 TCAF2A6NFQ2 919 aa11.16□□□□□ -0.62
CBX3-205ENST00000462165 CYSRT1A8MQ03 144 aa11.16□□□□□ -0.62
CBX3-205ENST00000462165 B8ZZF3 427 aa11.16□□□□□ -0.62
CBX3-205ENST00000462165 MCF2LO15068 1137 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms