RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 BTN3A1O00481 513 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 LTFP02788 710 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 PRKAR1AP10644 381 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 PTENP60484 403 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ARF5P84085 180 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 TRIM28Q13263 835 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ORC1Q13415 861 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 CRY1Q16526 586 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 OLFML2AQ68BL7 652 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 IL27RAQ6UWB1 636 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 EMC1Q8N766 993 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 CDRT15Q96T59 188 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 FUT8Q9BYC5 575 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SPG21Q9NZD8 308 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 UXTQ9UBK9 157 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RSL24D1Q9UHA3 163 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SNX6Q9UNH7 406 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 LOC100506127A0A0U1RQW1 187 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 TRDMT1O14717 391 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 KRT33AO76009 404 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RTN3O95197 1032 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 MT-CO1P00395 513 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RRM1P23921 792 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 LRPAP1P30533 357 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 GTF2A2P52657 109 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ANGEL2Q5VTE6 544 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 GPSM1Q86YR5 675 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 FBXO25Q8TCJ0 367 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 STK32AQ8WU08 396 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 HTR3CQ8WXA8 447 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 MNTQ99583 582 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF184Q99676 751 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SLC39A8Q9C0K1 460 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 FKBP14Q9NWM8 211 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SORCS3Q9UPU3 1222 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RBM7Q9Y580 266 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 GRIN3BO60391 1043 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 SEC24AO95486 1093 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 PLEKP08567 350 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 TAF5Q15542 800 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF470Q6ECI4 717 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 CYP2R1Q6VVX0 501 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ATL1Q8WXF7 558 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 RSPH9Q9H1X1 276 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ZMYM5Q9UJ78 669 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ERGIC3Q9Y282 383 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 SLC9A8Q9Y2E8 581 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 C15orf41Q9Y2V0 281 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 TAF6LQ9Y6J9 622 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 CNTNAP2Q9UHC6 1331 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 A0A0X1KG70 313 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 IRGMA1A4Y4 181 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 TSPAN9O75954 239 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 FAUP35544 74 aaKnown RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ELK3P41970 407 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 RAP1GAPP47736 663 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF268Q14587 947 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 NFIXQ14938 502 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 PAN2Q504Q3 1202 aaKnown RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 RD3Q7Z3Z2 195 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ARRDC4Q8NCT1 418 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 TCP10LQ8TDR4 215 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 CISHQ9NSE2 258 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 KCNK4Q9NYG8 393 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 DDX20Q9UHI6 824 aaKnown RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 PPIEQ9UNP9 301 aaKnown RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 NKRFO15226 690 aaKnown RBP eCLIP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 CATP04040 527 aaKnown RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 CRATP43155 626 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 GMFBP60983 142 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ERVK-24P63145 666 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 BCL2L1Q07817 233 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 PTGES3Q15185 160 aaKnown RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 SPDYCQ5MJ68 293 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 TMEM63BQ5T3F8 832 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 DENND5AQ6IQ26 1287 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 PGBD2Q6P3X8 592 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 PALB2Q86YC2 1186 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 IFNLR1Q8IU57 520 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 DSELQ8IZU8 1212 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 BSNDQ8WZ55 320 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ATG4CQ96DT6 458 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 PPP1R16AQ96I34 528 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 VPS35Q96QK1 796 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 EPB41L1Q9H4G0 881 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 IKZF3Q9UKT9 509 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 OPLAHO14841 1288 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 SLC25A12O75746 678 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 CAMTA2O94983 1202 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 LDOC1O95751 146 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 S100A6P06703 90 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 MGAT1P26572 445 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 OR1E1P30953 314 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 RPL14P50914 215 aaKnown RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 CHN2P52757 468 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 ABATP80404 500 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 SQLEQ14534 574 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 FBXO47Q5MNV8 452 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 DNAJC14Q6Y2X3 702 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 USP45Q70EL2 814 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms