RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 RPL36ALQ969Q0 106 aaKnown RBP6.82□□□□□ -1.32
CKAP2-204ENST00000459902 REEP2Q9BRK0 252 aa6.82□□□□□ -1.32
CKAP2-204ENST00000459902 POLR3GLQ9BT43 218 aa6.82□□□□□ -1.32
CKAP2-204ENST00000459902 CTDSP1Q9GZU7 261 aa6.82□□□□□ -1.32
CKAP2-204ENST00000459902 SPRTNQ9H040 489 aaPredicted RBP6.82□□□□□ -1.32
CKAP2-204ENST00000459902 AAMDCQ9H7C9 122 aa6.82□□□□□ -1.32
CKAP2-204ENST00000459902 ZNF304Q9HCX3 659 aa6.82□□□□□ -1.32
CKAP2-204ENST00000459902 TRNAU1APQ9NX07 287 aaKnown RBP6.82□□□□□ -1.32
CKAP2-204ENST00000459902 TUBA8Q9NY65 449 aaPredicted RBP6.82□□□□□ -1.32
CKAP2-204ENST00000459902 GGA3Q9NZ52 723 aa6.82□□□□□ -1.32
CKAP2-204ENST00000459902 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.82□□□□□ -1.32
CKAP2-204ENST00000459902 ZMYM2Q9UBW7 1377 aa6.82□□□□□ -1.32
CKAP2-204ENST00000459902 KIR2DS5A0A0G2JLQ3 304 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 KIR2DS3K7RE56 304 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 RHODO00212 210 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 NCAM2O15394 837 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 DHX16O60231 1041 aaKnown RBP6.81□□□□□ -1.32
CKAP2-204ENST00000459902 NEURL1O76050 574 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 METTL18O95568 372 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 PYGLP06737 847 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 POLBP06746 335 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 TNNT1P13805 278 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 CHRNA5P30532 468 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 CCR5P51681 352 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 ARHGAP8P85298 464 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 UBE3AQ05086 875 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 CHRNDQ07001 517 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 PLK5Q496M5 336 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 VWA5B1Q5TIE3 1220 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 ISM2Q6H9L7 571 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 DENND1BQ6P3S1 775 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 BBS12Q6ZW61 710 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 BRSK2Q8IWQ3 736 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 STAMQ92783 540 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 VOPP1Q96AW1 172 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 EME1Q96AY2 570 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 MAELQ96JY0 434 aaKnown RBP6.81□□□□□ -1.32
CKAP2-204ENST00000459902 CD207Q9UJ71 328 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 LRRFIP2Q9Y608 721 aaKnown RBP6.81□□□□□ -1.32
CKAP2-204ENST00000459902 PCSK5Q92824 1860 aa6.81□□□□□ -1.32
CKAP2-204ENST00000459902 ZNF335Q9H4Z2 1342 aaPredicted RBP6.8□□□□□ -1.32
CKAP2-204ENST00000459902 RRN3P2A6NIE6 340 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 C17orf100A8MU93 164 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 KLK10O43240 276 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 TLX3O43711 291 aaPredicted RBP6.8□□□□□ -1.32
CKAP2-204ENST00000459902 HLA-DQA2P01906 255 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 MTX1Q13505 466 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 RBMS2Q15434 407 aaKnown RBP6.8□□□□□ -1.32
CKAP2-204ENST00000459902 ETFDHQ16134 617 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 SH2D4BQ5SQS7 431 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 SHC4Q6S5L8 630 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 DDIASQ8IXT1 998 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 NANOGP1Q8N7R0 232 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 PIGOQ8TEQ8 1089 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 USP13Q92995 863 aaPredicted RBP6.8□□□□□ -1.32
CKAP2-204ENST00000459902 CLMNQ96JQ2 1002 aa6.8□□□□□ -1.32
CKAP2-204ENST00000459902 ZNF70Q9UC06 446 aaPredicted RBP6.8□□□□□ -1.32
CKAP2-204ENST00000459902 A0A0G2JK05 382 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 A0A1W2PPC1 479 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 FOXO6A8MYZ6 492 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 ZNF814B7Z6K7 855 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 CCNT1O60563 726 aaKnown RBP6.79□□□□□ -1.32
CKAP2-204ENST00000459902 FGBP02675 491 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 FCGR2AP12318 317 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 BYSLQ13895 437 aaKnown RBP6.79□□□□□ -1.32
CKAP2-204ENST00000459902 DLGAP5Q15398 846 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 SMTNL2Q2TAL5 461 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 C11orf87Q6NUJ2 197 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 PIP4P1Q86T03 277 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 SLC44A5Q8NCS7 719 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 DENND1AQ8TEH3 1009 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 MSI2Q96DH6 328 aaKnown RBP6.79□□□□□ -1.32
CKAP2-204ENST00000459902 RNFT2Q96EX2 444 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 ZFYVE19Q96K21 471 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 CADM1Q9BY67 442 aaKnown RBP6.79□□□□□ -1.32
CKAP2-204ENST00000459902 SLC29A3Q9BZD2 475 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 STN1Q9H668 368 aaKnown RBP6.79□□□□□ -1.32
CKAP2-204ENST00000459902 SPAG4Q9NPE6 437 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 THSD1Q9NS62 852 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 TMEM160Q9NX00 188 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 MSRB1Q9NZV6 116 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 UPB1Q9UBR1 384 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 GDAQ9Y2T3 454 aa6.79□□□□□ -1.32
CKAP2-204ENST00000459902 CCDC189A1A4V9 331 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 NPHP1O15259 732 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 ANP32CO43423 234 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 TSPAN3O60637 253 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 PRF1P14222 555 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 PMPCAQ10713 525 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 RABEP1Q15276 862 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 AP5B1Q2VPB7 878 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 WDR45BQ5MNZ6 344 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 TTC39AQ5SRH9 613 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 FAM171A1Q5VUB5 890 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 TTLL5Q6EMB2 1281 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 B4GALNT4Q76KP1 1039 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 ZNF778Q96MU6 729 aa6.78□□□□□ -1.32
CKAP2-204ENST00000459902 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.78□□□□□ -1.32
CKAP2-204ENST00000459902 HDAC6Q9UBN7 1215 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms