RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 MYLKQ15746 1914 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 KIAA1217Q5T5P2 1943 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 TARM1B6A8C7 271 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MATN2O00339 956 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SNAP29O95721 258 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CCNE2O96020 404 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 IL1BP01584 269 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 KRT18P05783 430 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 BDNFP23560 247 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MPSTP25325 297 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 POLR2BP30876 1174 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 EIF2B2P49770 351 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CLCNKBP51801 687 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MFAP3P55082 362 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 PITX1P78337 314 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CCNA1P78396 465 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MRPS9P82933 396 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 IRF9Q00978 393 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 PTK2BQ14289 1009 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SNRNP35Q16560 246 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CTF1Q16619 201 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 ZACNQ401N2 412 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 TDRD10Q5VZ19 366 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 THOC7Q6I9Y2 204 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CDR2LQ86X02 465 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 TMEM161BQ8NDZ6 487 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 ACER1Q8TDN7 264 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 BIRC7Q96CA5 298 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 NRDE2Q9H7Z3 1164 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MAP10Q9P2G4 905 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SNX9Q9Y5X1 595 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 ERVV-1B6SEH8 477 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 NEMP1O14524 444 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SCO1O75880 301 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 TROVE2P10155 538 aaKnown RBP eCLIP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 PCP11498 1178 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 IL2RBP14784 551 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC1A1P43005 524 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CDH8P55286 799 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 GPLD1P80108 840 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 PAPPAQ13219 1627 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 KCNJ11Q14654 390 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MORF4L2Q15014 288 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 PTPRRQ15256 657 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 C15orf59Q2T9L4 293 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CYBRD1Q53TN4 286 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 ITIH5Q86UX2 942 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 VPS36Q86VN1 386 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 RTKN2Q8IZC4 609 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM86B1Q8N7N1 296 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 KDM1BQ8NB78 822 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 BHLHE22Q8NFJ8 381 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 COX4I2Q96KJ9 171 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF641Q96N77 438 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 AGAP2Q99490 1192 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 NPLQ9BXD5 320 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC4A5Q9BY07 1137 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 NDEL1Q9GZM8 345 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 HOXD1Q9GZZ0 328 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 RAB20Q9NX57 234 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MOCS1Q9NZB8 636 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 PNMA6FA0A0J9YX94 578 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM155AB1AL88 458 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 NOP56O00567 594 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 OGTO15294 1046 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CFLARO15519 480 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 KPNA6O60684 536 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MT-ND3P03897 115 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 ENDOUP21128 410 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SHMT2P34897 504 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MAGEA3P43357 314 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 NAGLUP54802 743 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 C1QTNF8P60827 252 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 TSPY1Q01534 308 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 DPYSL3Q14195 570 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 BROXQ5VW32 411 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 DRICH1Q6PGQ1 229 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SPOCD1Q6ZMY3 1216 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 HAUS6Q7Z4H7 955 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 NUDCD3Q8IVD9 361 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 C10orf111Q8N326 155 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CBR4Q8N4T8 237 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 TEX37Q96LM6 180 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MTG1Q9BT17 334 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 OSBPL6Q9BZF3 934 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SNX25Q9H3E2 840 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 TMPRSS4Q9NRS4 437 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 COQ3Q9NZJ6 369 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 HERC5Q9UII4 1024 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 ZDHHC2Q9UIJ5 367 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 PTGDR2Q9Y5Y4 395 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 GVINP1Q7Z2Y8 2422 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 CELSR1Q9NYQ6 3014 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 TNPO2O14787 897 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 GCATO75600 419 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 KRT38O76015 456 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SEC24DO94855 1032 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 APRTP07741 180 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 OCM2P0CE71 109 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 OCMP0CE72 109 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms