RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 H0Y3Z8 333 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 KPNA6O60684 536 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SIN3BO75182 1162 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 AP1G2O75843 785 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 CYP11A1P05108 521 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ERVK-10P10266 1014 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SKIP12755 728 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 PCSK1P29120 753 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 MLH1P40692 756 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 THOC5Q13769 683 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 MUM1Q2TAK8 710 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 NAPEPLDQ6IQ20 393 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 EPGNQ6UW88 154 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 CNTN4Q8IWV2 1026 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ACTRT2Q8TDY3 377 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SREK1Q8WXA9 508 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 JADE3Q92613 823 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ZNF669Q96BR6 464 aaPredicted RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SMARCD1Q96GM5 515 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 FAM161BQ96MY7 647 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 RILPQ96NA2 401 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 PANX3Q96QZ0 392 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 GPR22Q99680 433 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 MRM3Q9HC36 420 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ANLNQ9NQW6 1124 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SLC17A6Q9P2U8 582 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 GIT1Q9Y2X7 761 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SCN10AQ9Y5Y9 1956 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ZBTB24O43167 697 aaPredicted RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 LYPLA1O75608 230 aaPredicted RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SNUPNO95149 360 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 KITP10721 976 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ACAT1P24752 427 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 CCNCP24863 283 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ADSLP30566 484 aaPredicted RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ARRB2P32121 409 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ALDH18A1P54886 795 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 AP2B1P63010 937 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 KLC1Q07866 573 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 CDH17Q12864 832 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 NME3Q13232 169 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 MPP3Q13368 585 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 FSCBQ5H9T9 825 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 PDPK2PQ6A1A2 396 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 FSTL4Q6MZW2 842 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 FAM171BQ6P995 826 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 ATG14Q6ZNE5 492 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 RIPOR1Q6ZS17 1223 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 STRA8Q7Z7C7 330 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 TP53INP2Q8IXH6 220 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 NPWQ8N729 165 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 FBXO27Q8NI29 283 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SCG3Q8WXD2 468 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■□□□□ 8
ECHDC1-209ENST00000454591 CMTM5Q96DZ9 223 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 PKMYT1Q99640 499 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 PTPN18Q99952 460 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 OSBPL1AQ9BXW6 950 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 CDH19Q9H159 772 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 SEPT10Q9P0V9 454 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 FNIP2Q9P278 1114 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 MARCOQ9UEW3 520 aaPredicted RBP12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 NEU3Q9UQ49 428 aa12.78□□□□□ -0.36
ECHDC1-209ENST00000454591 NLRC5Q86WI3 1866 aa12.77□□□□□ -0.36
ECHDC1-209ENST00000454591 KCNK1O00180 336 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 TRIM13O60858 407 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 THP07101 528 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 ANPEPP15144 967 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 YBX3P16989 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 CPA2P48052 419 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 COPAP53621 1224 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 RPL26P61254 145 aaKnown RBP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 MRPS6P82932 125 aaKnown RBP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 PURAQ00577 322 aaKnown RBP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 NRG1Q02297 640 aaPredicted RBP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 ZBTB17Q13105 803 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 PRPSAP1Q14558 356 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 TWF2Q6IBS0 349 aaKnown RBP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 CAPRIN2Q6IMN6 1127 aaKnown RBP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 GPRIN1Q7Z2K8 1008 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 LZTR1Q8N653 840 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 URGCPQ8TCY9 931 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 PCED1BQ96HM7 432 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 CNDP1Q96KN2 507 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 NR1H4Q96RI1 486 aaPredicted RBP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 IL12RB2Q99665 862 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 ACBD6Q9BR61 282 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 CCDC28BQ9BUN5 200 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 C1QTNF1Q9BXJ1 281 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 AP5M1Q9H0R1 490 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 RHOJQ9H4E5 214 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 RNF19AQ9NV58 838 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 DDIT4Q9NX09 232 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms