RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TRIM5Q9C035 493 aa15□□□□□ -0.01
USP39-206ENST00000448971 PARVAQ9NVD7 372 aa15□□□□□ -0.01
USP39-206ENST00000448971 WDR70Q9NW82 654 aa15□□□□□ -0.01
USP39-206ENST00000448971 KIAA1522Q9P206 1035 aaPredicted RBP15□□□□□ -0.01
USP39-206ENST00000448971 CNOT8Q9UFF9 292 aaKnown RBP15□□□□□ -0.01
USP39-206ENST00000448971 ADAMTS1Q9UHI8 967 aa15□□□□□ -0.01
USP39-206ENST00000448971 PILRBQ9UKJ0 227 aa15□□□□□ -0.01
USP39-206ENST00000448971 PLA2G4CQ9UP65 541 aa15□□□□□ -0.01
USP39-206ENST00000448971 SNX10Q9Y5X0 201 aa15□□□□□ -0.01
USP39-206ENST00000448971 SCINQ9Y6U3 715 aa15□□□□□ -0.01
USP39-206ENST00000448971 MUC22E2RYF6 1773 aaPredicted RBP15□□□□□ -0.01
USP39-206ENST00000448971 A0A1W2PQF6 199 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 TCRBV5S1A1TA0A578 114 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 UPK3BL1B0FP48 263 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 UPK3BL2E5RIL1 263 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 E9PAM4 449 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 I6L893 689 aaPredicted RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 RTN2O75298 545 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 FTLP02792 175 aaPredicted RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 PLEKP08567 350 aaPredicted RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 DLDP09622 509 aaKnown RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 GZMAP12544 262 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 ENGP17813 658 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 GABRG2P18507 467 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 PRKCHP24723 683 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 CSKP41240 450 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 NUMBP49757 651 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 IRAK1P51617 712 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 ZNF143P52747 638 aaPredicted RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 ST8SIA6P61647 398 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 RPL7AP62424 266 aaKnown RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 SEMA3BQ13214 749 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 COL9A2Q14055 689 aaPredicted RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 PLEKHG6Q3KR16 790 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 RAB6CQ53S08 254 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 ACBD5Q5T8D3 534 aaPredicted RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 RNF219Q5W0B1 726 aaPredicted RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 KIAA1324Q6UXG2 1013 aaKnown RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 ARMCX6Q7L4S7 300 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 C14orf80Q86SX3 495 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 CACUL1Q86Y37 369 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 NUSAP1Q9BXS6 441 aaKnown RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 RAB6CQ9H0N0 254 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 DEF6Q9H4E7 631 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 ZNHIT6Q9NWK9 470 aaKnown RBP14.99□□□□□ -0.01
USP39-206ENST00000448971 MYO1AQ9UBC5 1043 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 NEUROG3Q9Y4Z2 214 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 KNL1Q8NG31 2342 aa14.99□□□□□ -0.01
USP39-206ENST00000448971 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.98□□□□□ -0.01
USP39-206ENST00000448971 HYAL3O43820 417 aaPredicted RBP14.98□□□□□ -0.01
USP39-206ENST00000448971 SRGAP2O75044 1071 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 MFAP3LO75121 409 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 CLDN11O75508 207 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 ENDOD1O94919 500 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 ASLP04424 464 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 RHOCP08134 193 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 MYBL1P10243 752 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 HLA-EP13747 358 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 NDUFV2P19404 249 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 ITPKAP23677 461 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 PSMA2P25787 234 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 MAPK8P45983 427 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 CDH4P55283 916 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 OXCT1P55809 520 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 HDAC4P56524 1084 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 ZNF177Q13360 481 aaPredicted RBP14.98□□□□□ -0.01
USP39-206ENST00000448971 TSR1Q2NL82 804 aaKnown RBP14.98□□□□□ -0.01
USP39-206ENST00000448971 PPP1R15BQ5SWA1 713 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 SCYL2Q6P3W7 929 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 SARM1Q6SZW1 724 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 TMC6Q7Z403 805 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 TFAP2DQ7Z6R9 452 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 KIAA0907Q7Z7F0 614 aaPredicted RBP14.98□□□□□ -0.01
USP39-206ENST00000448971 CCDC185Q8N715 623 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 ZNF366Q8N895 744 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 HAPLN3Q96S86 360 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 INTS6Q9UL03 887 aaKnown RBP14.98□□□□□ -0.01
USP39-206ENST00000448971 MSRB2Q9Y3D2 182 aa14.98□□□□□ -0.01
USP39-206ENST00000448971 CELSR3Q9NYQ7 3312 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 FAM221BA6H8Z2 402 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 CNTN5O94779 1100 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 CAPNS1P04632 268 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 MAMLD1Q13495 774 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 SLC12A1Q13621 1099 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 ENPP2Q13822 863 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 BYSLQ13895 437 aaKnown RBP14.97□□□□□ -0.01
USP39-206ENST00000448971 PTPRNQ16849 979 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 ALFQ53S48 1182 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 EFHC2Q5JST6 749 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 LYSMD4Q5XG99 296 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 PLEKHA7Q6IQ23 1121 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 CXorf57Q6NSI4 855 aaKnown RBP14.97□□□□□ -0.01
USP39-206ENST00000448971 NTAN1Q96AB6 310 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 LMLNQ96KR4 655 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 CNPY3Q9BT09 278 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 MUC3BQ9H195 1237 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 SLC6A17Q9H1V8 727 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 SLC32A1Q9H598 525 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 MRPL47Q9HD33 250 aaKnown RBP14.97□□□□□ -0.01
USP39-206ENST00000448971 ABHD10Q9NUJ1 306 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms