RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 CRISPLD1Q9H336 500 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 PPANQ9NQ55 473 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 NUDT5Q9UKK9 219 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 NEU3Q9UQ49 428 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 SSX2IPQ9Y2D8 614 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 AAR2Q9Y312 384 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 MAD1L1Q9Y6D9 718 aa10.82□□□□□ -0.68
VIPAS39-203ENST00000448935 SHROOM3Q8TF72 1996 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 SLC12A8A0AV02 714 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 ARHGAP42A6NI28 874 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 DFFAO00273 331 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 PRPF4O43172 522 aaKnown RBP eCLIP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 TLR5O60602 858 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 AVILO75366 819 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 SOAT2O75908 522 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 SUN1O94901 812 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 ABLIM3O94929 683 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 AP2A1O95782 977 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 IGLV3-27P01718 113 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 ATF6P18850 670 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 PRKCHP24723 683 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 ATP5C1P36542 298 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 ALDH1A3P47895 512 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 WDR5P61964 334 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 TAF12Q16514 161 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 MS4A13Q5J8X5 152 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 RASIP1Q5U651 963 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 KLHDC10Q6PID8 442 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 DDX53Q86TM3 631 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 LINC00523Q86TU6 105 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 NLRP14Q86W24 1093 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 CYP4X1Q8N118 509 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 DEPDC4Q8N2C3 294 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 UMODL1-AS1Q8N2C9 162 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 GPR152Q8TDT2 470 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 GIPC2Q8TF65 315 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 SLC44A1Q8WWI5 657 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 CDKL2Q92772 493 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 FATE1Q969F0 183 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 ABHD8Q96I13 439 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 TRABDQ9H4I3 376 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 LRRC40Q9H9A6 602 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 RC3H2Q9HBD1 1191 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 PRDM5Q9NQX1 630 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 BFARQ9NZS9 450 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 SAMD15Q9P1V8 674 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 DNMT3LQ9UJW3 386 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 ZNF180Q9UJW8 692 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 MAGED2Q9UNF1 606 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 PCDHA11Q9Y5I1 949 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 COL4A6Q14031 1691 aa10.81□□□□□ -0.68
VIPAS39-203ENST00000448935 IGLV3-10A0A075B6K4 115 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 FAM47DPA6NHR8 397 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MATN3O15232 486 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 ZBTB24O43167 697 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 ANXA9O76027 345 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NEBLO76041 1014 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CCNB1P14635 433 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CSF2RAP15509 400 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 PGAM1P18669 254 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 ELF1P32519 619 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 SERPINB9P50453 376 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NAB1Q13506 487 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 KBTBD12Q3ZCT8 623 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CRTC2Q53ET0 693 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 PIK3R6Q5UE93 754 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 AFMIDQ63HM1 303 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 STEAP4Q687X5 459 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NAPEPLDQ6IQ20 393 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 ZNF449Q6P9G9 518 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 SLC26A11Q86WA9 606 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 LRRC6Q86X45 466 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MIB1Q86YT6 1006 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 IGDCC3Q8IVU1 814 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 ARHGAP12Q8IWW6 846 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 TP53INP2Q8IXH6 220 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 DOCK4Q8N1I0 1966 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 FAM174AQ8TBP5 190 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MDM1Q8TC05 714 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 DCAKDQ8WVC6 231 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 ATXN2LQ8WWM7 1075 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MYO18AQ92614 2054 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 VWCEQ96DN2 955 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CHMP6Q96FZ7 201 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CELF6Q96J87 481 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 ZNF512Q96ME7 567 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CCT8L2Q96SF2 557 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CLSTN3Q9BQT9 956 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NACA2Q9H009 215 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NSRP1Q9H0G5 558 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 TMEM248Q9NWD8 314 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 TRPM5Q9NZQ8 1165 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 UXTQ9UBK9 157 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 TTLL3Q9Y4R7 772 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 PCDHB12Q9Y5F1 795 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NUP205Q92621 2012 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MAGEB16A2A368 324 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 EBAG9O00559 213 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms