RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 IL4RP24394 825 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 CXCL12P48061 93 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 SLC6A11P48066 632 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 FNTBP49356 437 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 CDH4P55283 916 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 ZNF177Q13360 481 aaPredicted RBP17.68■□□□□ 0.42
LIME1-202ENST00000444951 CDH18Q13634 790 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 TTC39BQ5VTQ0 682 aaPredicted RBP17.68■□□□□ 0.42
LIME1-202ENST00000444951 DCAF12L1Q5VU92 463 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 NAIF1Q69YI7 327 aaPredicted RBP17.68■□□□□ 0.42
LIME1-202ENST00000444951 PKN3Q6P5Z2 889 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 MFN1Q8IWA4 741 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 SPEM1Q8N4L4 309 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 NETO2Q8NC67 525 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 FAM71BQ8TC56 605 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.68■□□□□ 0.42
LIME1-202ENST00000444951 TSC1Q92574 1164 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
LIME1-202ENST00000444951 ZNF670Q9BS34 389 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 ARHGEF4Q9NR80 690 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 ETNK2Q9NVF9 386 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 DNAJC17Q9NVM6 304 aaKnown RBP17.68■□□□□ 0.42
LIME1-202ENST00000444951 NEU3Q9UQ49 428 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 MFHAS1Q9Y4C4 1052 aa17.68■□□□□ 0.42
LIME1-202ENST00000444951 A0A1B0GVM2 712 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 CTAGE9A4FU28 777 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 TCAF2A6NFQ2 919 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 FGF10O15520 208 aaPredicted RBP17.67■□□□□ 0.42
LIME1-202ENST00000444951 HOXC11O43248 304 aaPredicted RBP17.67■□□□□ 0.42
LIME1-202ENST00000444951 HRO43593 1189 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 CLDN11O75508 207 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 LUC7L3O95232 432 aaKnown RBP17.67■□□□□ 0.42
LIME1-202ENST00000444951 OR1E1P30953 314 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 CASQ1P31415 396 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 GJA4P35212 333 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 CETN2P41208 172 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 CDKN2BP42772 138 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 HCAR3P49019 387 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 ZNF135P52742 658 aaPredicted RBP17.67■□□□□ 0.42
LIME1-202ENST00000444951 ETF1P62495 437 aaKnown RBP17.67■□□□□ 0.42
LIME1-202ENST00000444951 KDSRQ06136 332 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 CCINQ13939 588 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 DPYSQ14117 519 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 PUM1Q14671 1186 aaKnown RBP eCLIP17.67■□□□□ 0.42
LIME1-202ENST00000444951 C5orf22Q49AR2 442 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 SEL1L2Q5TEA6 688 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 C12orf40Q86WS4 652 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 RALGPS2Q86X27 583 aaPredicted RBP17.67■□□□□ 0.42
LIME1-202ENST00000444951 PCDH19Q8TAB3 1148 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 WFDC5Q8TCV5 224 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 ZNF592Q92610 1267 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 MSANTD3Q96H12 275 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 XPO6Q96QU8 1125 aaKnown RBP17.67■□□□□ 0.42
LIME1-202ENST00000444951 NDFIP2Q9NV92 336 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 MARK1Q9P0L2 795 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 RCOR3Q9P2K3 495 aaPredicted RBP17.67■□□□□ 0.42
LIME1-202ENST00000444951 MYOFQ9NZM1 2061 aa17.67■□□□□ 0.42
LIME1-202ENST00000444951 SDK1Q7Z5N4 2213 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 TRIM24O15164 1050 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 CEP104O60308 925 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 HTR7P34969 479 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 LRRC32Q14392 662 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 GAB4Q2WGN9 574 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 TFDP3Q5H9I0 405 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 FSCBQ5H9T9 825 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 MPP7Q5T2T1 576 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 HEATR6Q6AI08 1181 aaKnown RBP17.66■□□□□ 0.42
LIME1-202ENST00000444951 C1orf228Q6PIY5 440 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 TMCO3Q6UWJ1 677 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 CHST9Q7L1S5 443 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 NLRP14Q86W24 1093 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 CCDC33Q8N5R6 958 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 RTL3Q8N8U3 475 aaKnown RBP17.66■□□□□ 0.42
LIME1-202ENST00000444951 CELF6Q96J87 481 aaKnown RBP17.66■□□□□ 0.42
LIME1-202ENST00000444951 RNF157Q96PX1 679 aa17.66■□□□□ 0.42
LIME1-202ENST00000444951 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 APOL1O14791 398 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 TULP3O75386 442 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 RHOCP08134 193 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 DGKGP49619 791 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 NRLP54845 237 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 CCDC181Q5TID7 509 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 RNF219Q5W0B1 726 aaPredicted RBP17.65■□□□□ 0.42
LIME1-202ENST00000444951 PRR23BQ6ZRT6 265 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 ZNF354CQ86Y25 554 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 PQLC3Q8N755 202 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 HAUS1Q96CS2 278 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 HERPUD2Q9BSE4 406 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 OSBPL8Q9BZF1 889 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 MUC3BQ9H195 1237 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 ABCB8Q9NUT2 735 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 POLR3BQ9NW08 1133 aaPredicted RBP17.65■□□□□ 0.42
LIME1-202ENST00000444951 TMEM248Q9NWD8 314 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 DEC1Q9P2X7 70 aa17.65■□□□□ 0.42
LIME1-202ENST00000444951 DCLK1O15075 740 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 FANCGO15287 622 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 CACNG3O60359 315 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 CST8O60676 142 aa17.64■□□□□ 0.41
LIME1-202ENST00000444951 PAPSS2O95340 614 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms