RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SYNCRIPO60506 623 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 ASS1P00966 412 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 ASGR2P07307 311 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NUDT17P0C025 328 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 EIF2AK2P19525 551 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 CD72P21854 359 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 EEF1GP26641 437 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 PKLRP30613 574 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 RRM2P31350 389 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GUCY1A2P33402 732 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ZNF76P36508 570 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PBX1P40424 430 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SLC19A1P41440 591 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 HTR2BP41595 481 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SLC1A4P43007 532 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ALDH1A3P47895 512 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 HSPA13P48723 471 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PEX3P56589 373 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CNTN2Q02246 1040 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ZNF33BQ06732 778 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 VAC14Q08AM6 782 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MGAT5Q09328 741 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 BFSP1Q12934 665 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 AUHQ13825 339 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 ZNF267Q14586 743 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 ZNF846Q147U1 533 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PDK1Q15118 436 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PUM3Q15397 648 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 KCNA10Q16322 511 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 UAP1L1Q3KQV9 507 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CRY2Q49AN0 593 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 FAM209BQ5JX69 171 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CDKAL1Q5VV42 579 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GARNL3Q5VVW2 1013 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ATG16L1Q676U5 607 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NANOGP8Q6NSW7 305 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 KIAA1211LQ6NV74 962 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DNAAF5Q86Y56 855 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TRIM59Q8IWR1 403 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GALNT12Q8IXK2 581 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PALM2Q8IXS6 379 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ZNF786Q8N393 782 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 METTL13Q8N6R0 699 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PI4K2BQ8TCG2 481 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ACTRT1Q8TDG2 376 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 JPH3Q8WXH2 748 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 GLG1Q92896 1179 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ARHGEF26Q96DR7 871 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MTMR8Q96EF0 704 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SGF29Q96ES7 293 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CEP95Q96GE4 821 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DCUN1D1Q96GG9 259 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CLPTM1LQ96KA5 538 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SCYL1Q96KG9 808 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ZNF560Q96MR9 790 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MIPEPQ99797 713 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 KATNAL1Q9BW62 490 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TARS2Q9BW92 718 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 BTBD2Q9BX70 525 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TEX13BQ9BXU2 312 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 FRMD8Q9BZ67 464 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 ROPN1BQ9BZX4 212 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 TRIT1Q9H3H1 467 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 SAV1Q9H4B6 383 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 ROPN1Q9HAT0 212 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 TAS2R1Q9NYW7 299 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GMEB2Q9UKD1 530 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SNX5Q9Y5X3 404 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TOGARAM1Q9Y4F4 1720 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 RP1P56715 2156 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 POLEQ07864 2286 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 AKAP12Q02952 1782 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DLEC1Q9Y238 1755 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 A0A087WXM4 84 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TRAV20A0A0B4J274 112 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 A0A1W2PQC6 194 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NT5C1B-RDH14C9J2C7 533 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CLDN25C9JDP6 229 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 USP17L12C9JPN9 530 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 USP17L21D6R901 530 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 PRSS44E7EML9 344 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 GNB5O14775 395 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TNFRSF21O75509 655 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 S1PR4O95977 384 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CD4P01730 458 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TP53P04637 393 aaPredicted RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 GSNP06396 782 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CLTBP09497 229 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 IL9P15248 144 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 NAGAP17050 411 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TAC1P20366 129 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CXCR2P25025 360 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MCM7P33993 719 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 THPOP40225 353 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 SLC26A3P40879 764 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 CCT3P49368 545 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 RAD23AP54725 363 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 RAD51Q06609 339 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms