RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 ELAVL3Q14576 367 aaKnown RBP16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 ZACNQ401N2 412 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 NADSYN1Q6IA69 706 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 C14orf80Q86SX3 495 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 VASH2Q86V25 355 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 C12orf56Q8IXR9 622 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 EDEM1Q92611 657 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 ULBP1Q9BZM6 244 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 APOBEC3GQ9HC16 384 aaKnown RBP16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 OLA1Q9NTK5 396 aaKnown RBP16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 EVA1BQ9NVM1 165 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 ACSL6Q9UKU0 697 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 CLIC4Q9Y696 253 aa16.88■□□□□ 0.29
HMGN1P19-201ENST00000436976 TULP2O00295 520 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 ZBED1O96006 694 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 NUMBP49757 651 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 ECT2LQ008S8 904 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 GCNT7Q6ZNI0 430 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 CCDC73Q6ZRK6 1079 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 APCDD1Q8J025 514 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 ZNF557Q8N988 423 aaPredicted RBP16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 ZNF548Q8NEK5 533 aaPredicted RBP16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 TAF4BQ92750 862 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 IFT43Q96FT9 208 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 DNAJC28Q9NX36 388 aa16.87■□□□□ 0.29
HMGN1P19-201ENST00000436976 PLD2O14939 933 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 EXOC3O60645 756 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 IGLV3-27P01718 113 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 RPN1P04843 607 aaKnown RBP16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 NEFLP07196 543 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 CD58P19256 250 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 TRIM21P19474 475 aaKnown RBP16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 GJB2P29033 226 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 CLDN2P57739 230 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 SNRPFP62306 86 aaKnown RBP16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 ABI3BPQ7Z7G0 1075 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 B3GNT8Q7Z7M8 397 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 CARNMT1Q8N4J0 409 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 HJURPQ8NCD3 748 aaPredicted RBP16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 TPCN2Q8NHX9 752 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 LIN37Q96GY3 246 aaPredicted RBP16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 IRX2Q9BZI1 471 aaPredicted RBP16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 UBXN6Q9BZV1 441 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 LRRC4CQ9HCJ2 640 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 SRPK3Q9UPE1 567 aa16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 SRPRBQ9Y5M8 271 aaKnown RBP16.86■□□□□ 0.29
HMGN1P19-201ENST00000436976 IRAK2O43187 625 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 ACSL4O60488 711 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 HLA-DRAP01903 254 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 LIPCP11150 499 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 HGFP14210 728 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 UGT1A5P35504 534 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 TXLNAP40222 546 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 CASRP41180 1078 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 HNRNPKP61978 463 aaKnown RBP eCLIP16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 DEFB133Q30KQ1 61 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 ZNF394Q53GI3 561 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 FAM26FQ5R3K3 315 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 BSPRYQ5W0U4 402 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 OR6B2Q6IFH4 312 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 SV2AQ7L0J3 742 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 JAMLQ86YT9 394 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 FRS2Q8WU20 508 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 SPAG5Q96R06 1193 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 PREBQ9HCU5 417 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 GPR27Q9NS67 375 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 PLEKHB1Q9UF11 243 aaPredicted RBP16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 KLF15Q9UIH9 416 aa16.85■□□□□ 0.29
HMGN1P19-201ENST00000436976 A0A1W2PQU0 124 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 YJEFN3A6XGL0 299 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 E7ENQ6 273 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 MUSKO15146 869 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 CDH18Q13634 790 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 MORC3Q14149 939 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 FZD2Q14332 565 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 ZNF284Q2VY69 593 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 KMT5BQ4FZB7 885 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 MANEAQ5SRI9 462 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 C1orf220Q5T0J3 134 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 PIP5KL1Q5T9C9 394 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 CFAP52Q8N1V2 620 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 FBXO39Q8N4B4 442 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 PDILTQ8N807 584 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 RNF139Q8WU17 664 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 ADNPQ9H2P0 1102 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 CYP3A43Q9HB55 503 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 TFIP11Q9UBB9 837 aaKnown RBP16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 SALL4Q9UJQ4 1053 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 CEP83Q9Y592 693 aa16.84■□□□□ 0.29
HMGN1P19-201ENST00000436976 NTN3O00634 580 aaPredicted RBP16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 LUC7L3O95232 432 aaKnown RBP16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 PIK3CAP42336 1068 aa16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 SPIDRQ14159 915 aa16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 NR0B2Q15466 257 aa16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 RNF219Q5W0B1 726 aaPredicted RBP16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 Q6ZSR6 202 aa16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 RAB11FIP2Q7L804 512 aa16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 BRAPQ7Z569 592 aa16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 BMFQ96LC9 184 aa16.83■□□□□ 0.28
HMGN1P19-201ENST00000436976 PPM1HQ9ULR3 514 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms